bifunctional aspartokinase/homoserine dehydrogenase 1	1.1.1.3	thrA	UniRef100_P00561
homoserine kinase	2.7.1.39	thrB	TIGR00191
threonine synthase	4.2.3.1	thrC	TIGR00260
conserved hypothetical protein			UniRef100_C1NBU8
			
conserved hypothetical protein			UniRef100_C4ZPT3
amino acid carrier family protein		agcS	TIGR00835
transaldolase	2.2.1.2	tal	TIGR00874
molybdopterin adenylyltransferase		mog	UniRef100_P0AF04
inner membrane protein yaaH		yaaH	UniRef100_P0AC99
ubiquinol-cytochrome C chaperone family protein			PF03981.7
conserved hypothetical protein			PF10807.3
chaperone protein DnaK		dnaK	TIGR02350
chaperone protein DnaJ		dnaJ	TIGR02349
transposase DDE domain protein			PF01609.16
			
			
na+/H+ antiporter NhaA		nhaA	TIGR00773
transcriptional activator protein nhaR		nhaR	UniRef100_P0A9G2
putative transposase			PF03400.8
			
ribosomal protein S20		rpsT	TIGR00029
riboflavin biosynthesis protein RibF	2.7.1.26	ribF	TIGR00083
isoleucine--tRNA ligase	6.1.1.5	ileS	TIGR00392
signal peptidase II	3.4.23.36	lspA	TIGR00077
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase	5.2.1.8	fkpB	UniRef100_P0AEM2
4-hydroxy-3-methylbut-2-enyl diphosphate reductase	1.17.1.2	ispH	TIGR00216
non-specific ribonucleoside hydrolase rihC	3.2.-.-	rihC	UniRef100_B7L4F2
dihydrodipicolinate reductase	1.3.1.26	dapB	TIGR00036
carbamoyl-phosphate synthase small chain	6.3.5.5	carA	UniRef100_P0A6F2
carbamoyl-phosphate synthase large chain	6.3.5.5	carB	UniRef100_P00968
putative hypothe			UniRef100_E2WQH1
conserved hypothetical protein			PF07180.6
bacterial transferase hexapeptide family protein			PF00132.19
carnitinyl-CoA dehydratase	4.2.1.-	caiD	UniRef100_B1IRE0
AMP-binding enzyme family protein			PF00501.23
crotonobetainyl-CoA:carnitine CoA-transferase	2.8.3.-	caiB	UniRef100_C4ZPW4
crotonobetainyl-CoA dehydrogenase	1.3.99.-	caiA	UniRef100_A7ZHD0
L-carnitine/gamma-butyrobetaine antiporter		caiT	UniRef100_A7ZHD1
electron transfer flavodomain protein			PF01012.16
electron transfer flavodomain protein			PF01012.16
FAD binding domain protein			PF01494.14
putative ferredoxin			UniRef100_P68648
sugar (and other) transporter family protein			PF00083.19
glutathione-regulated potassium-efflux system ancillary protein kefF		kefF	UniRef100_A7ZHD9
glutathione-regulated potassium-efflux system protein kefC		kefC	UniRef100_C4ZPX3
dihydrofolate reductase	1.5.1.3	folA	UniRef100_P0ABQ5
bis	3.6.1.41	apaH	TIGR00668
conserved hypothetical protein			PF04379.9
dimethyladenosine transferase	2.1.1.-	ksgA	TIGR00755
4-hydroxythreonine-4-phosphate dehydrogenase	1.1.1.262	pdxA	TIGR00557
surA N-terminal domain protein			PF13624.1
LPS-assembly protein lptD		lptD	UniRef100_P31554
dnaJ-like protein DjlA		djlA	UniRef100_P31680
putative undecaprenyl pyrophosphate phosphatase [multifunctional]			UniRef100_P39220
hypothetical protein			default
pseudouridine synthase, RluA family protein	5.4.99.-		TIGR00005
RNA polymerase-associated protein rapA	3.6.4.-	rapA	UniRef100_B7MAI2
DNA polymerase II	2.7.7.7	polB	UniRef100_P21189
L-ribulose-5-phosphate 4-epimerase	5.1.3.4	araD	TIGR00760
L-arabinose isomerase	5.3.1.4	araA	UniRef100_P08202
L-ribulokinase	2.7.1.16	araB	TIGR01234
arabinose operon regulatory protein		araC	UniRef100_P0A9E1
inner membrane protein yabI		yabI	UniRef100_P30149
thiamine ABC transporter, ATP-binding protein	3.6.3.-	thiQ	TIGR01277
thiamine/thiamine pyrophosphate ABC transporter, permease protein		thiP	TIGR01253
thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein		thiB	TIGR01276
HTH-type transcriptional regulator sgrR		sgrR	UniRef100_P33595
			
sugar efflux transporter A		setA	UniRef100_P31675
3-isopropylmalate dehydratase small subunit	4.2.1.33	leuD	UniRef100_A7ZHG3
3-isopropylmalate dehydratase large subunit	4.2.1.33	leuC	UniRef100_B7MAJ7
3-isopropylmalate dehydrogenase	1.1.1.85	leuB	TIGR00169
2-isopropylmalate synthase	2.3.3.13	leuA	TIGR00973
putative HTH-type transcriptional regulator leuO			UniRef100_P10151
acetolactate synthase, large subunit, biosynthetic type	2.2.1.6	ilvB	TIGR00118
acetolactate synthase, small subunit	2.2.1.6	ilvN	TIGR00119
fructose repressor		fruR	UniRef100_P0ACP3
mraZ family protein			PF02381.13
S-adenosyl-methyltransferase MraW	2.1.1.-	mraW	TIGR00006
cell division protein FtsL		ftsL	TIGR02209
peptidoglycan synthase ftsI	2.4.1.129	ftsI	UniRef100_P0AD69
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	6.3.2.13	murE	UniRef100_P22188
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	6.3.2.10	murF	UniRef100_P11880
phospho-N-acetylmuramoyl-pentapeptide-transferase	2.7.8.13	mraY	TIGR00445
UDP-N-acetylmuramoylalanine--D-glutamate ligase	6.3.2.9	murD	TIGR01087
cell division protein FtsW		ftsW	TIGR02614
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	2.4.1.227	murG	TIGR01133
UDP-N-acetylmuramate--alanine ligase	6.3.2.8	murC	TIGR01082
D-alanine--D-alanine ligase B	6.3.2.4	ddlB	UniRef100_P07862
cell division protein ftsQ		ftsQ	UniRef100_P06136
cell division protein FtsA		ftsA	TIGR01174
cell division protein FtsZ		ftsZ	TIGR00065
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	3.5.1.-	lpxC	TIGR00325
secretion monitor		secM	UniRef100_B7LFW7
preprotein translocase, SecA subunit		secA	TIGR00963
mutator mutT protein	3.6.1.-	mutT	UniRef100_P08337
conserved hypothetical protein			UniRef100_A7ZHJ2
conserved hypothetical protein			PF07072.6
dephospho-CoA kinase	2.7.1.24	coaE	TIGR00152
guanosine monophosphate reductase	1.7.1.7	guaC	TIGR01305
type II secretion system (T2SS), F family protein			PF00482.18
type II/IV secretion system family protein			PF00437.15
prepilin-type N-terminal cleavage/methylation domain protein			TIGR02532
nicotinate-nucleotide diphosphorylase	2.4.2.19	nadC	TIGR00078
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	3.5.1.28	ampD	UniRef100_P82974
protein AmpE		ampE	UniRef100_P0AE14
aromatic amino acid transport protein AroP		aroP	UniRef100_P15993
bacterial regulatory s, gntR family protein			PF00392.16
pyruvate dehydrogenase (acetyl-transferring), homodimeric type	1.2.4.1	aceE	TIGR00759
dihydrolipoyllysine-residue acetyltransferase	2.3.1.12	aceF	TIGR01348
dihydrolipoyl dehydrogenase	1.8.1.4	lpdA	TIGR01350
conserved hypothetical protein			PF11737.3
aconitate hydratase 2	4.2.1.3	acnB	TIGR00117
conserved hypothetical protein			PF06062.6
S-adenosylmethionine decarboxylase proenzyme	4.1.1.50	speD	TIGR03331
spermidine synthase	2.5.1.16	speE	TIGR00417
bacterial chaperone lipo family protein			PF09691.5
blue copper oxidase CueO		cueO	UniRef100_P36649
quinoprotein glucose dehydrogenase	1.1.5.2	gcd	UniRef100_P15877
hypoxanthine phosphoribosyltransferase	2.4.2.8	hpt	TIGR01203
carbonic anhydrase 2	4.2.1.1	can	UniRef100_P61517
conserved hypothetical protein			UniRef100_P36879
inner membrane transport permease yadH		yadH	UniRef100_P0AFN8
PTS system fructose IIA component family protein			PF03610.11
polysaccharide deacetylase family protein			PF01522.16
aspartate 1-decarboxylase	4.1.1.11	panD	TIGR00223
conserved hypothetical family protein			TIGR01784
pantoate--beta-alanine ligase	6.3.2.1	panC	TIGR00018
3-methyl-2-oxobutanoate hydroxymethyltransferase	2.1.2.11	panB	TIGR00222
fimbrial family protein			PF00419.15
conserved hypothetical protein			UniRef100_P37016
fimbrial family protein			PF00419.15
fimbrial family protein			PF00419.15
outer membrane usher protein htrE		htrE	UniRef100_P33129
gram-negative pili assembly chaperone, C-terminal domain protein			PF02753.12
fimbrial family protein			PF00419.15
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	2.7.6.3	folK	TIGR01498
poly(A) polymerase	2.7.7.19	pcnB	UniRef100_P0ABF3
glutamyl-queuosine tRNA(Asp) synthetase	6.1.1.-	gluQ	TIGR03838
RNA polymerase-binding protein DksA		dksA	TIGR02420
sugar fermentation stimulation protein		sfsA	TIGR00230
2'-5' RNA ligase	6.5.1.-		TIGR02258
ATP-dependent helicase HrpB	3.6.4.-	hrpB	TIGR01970
penicillin-binding protein 1B		mrcB	TIGR02071
ferrichrome-iron receptor		fhuA	UniRef100_P06971
iron(3+)-hydroxamate import ATP-binding protein FhuC	3.6.3.34	fhuC	UniRef100_P07821
iron(3+)-hydroxamate-binding protein fhuD		fhuD	UniRef100_P07822
iron(3+)-hydroxamate import system permease protein fhuB		fhuB	UniRef100_P06972
glutamate-1-semialdehyde-2,1-aminomutase	5.4.3.8	hemL	TIGR00713
H(+)/Cl(-) exchange transporter ClcA		clcA	UniRef100_A7ZHP7
iron-sulfur cluster insertion protein erpA		erpA	UniRef100_A7ZHP8
conserved hypothetical protein			UniRef100_P0AFP1
vitamin B12-binding protein		btuF	UniRef100_P37028
MTA/SAH nucleosidase	3.2.2.16	mtnN	TIGR01704
deoxyguanosinetriphosphate triphosphohydrolase	3.1.5.1	dgt	UniRef100_C4ZRQ3
protease do	3.4.21.-	degP	UniRef100_P0C0V1
carbohydrate diacid regulator		cdaR	UniRef100_P37047
conserved hypothetical protein			PF11944.3
calcineurin-like phosphoesterase family protein			PF00149.23
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	2.3.1.117	dapD	TIGR00965
protein-P-II uridylyltransferase	2.7.7.59	glnD	TIGR01693
methionine aminopeptidase, type I	3.4.11.18	map	TIGR00500
putative predicted protein			UniRef100_D7JHY7
ribosomal protein S2		rpsB	TIGR01011
translation elongation factor Ts		tsf	TIGR00116
UMP kinase	2.7.4.22	pyrH	TIGR02075
ribosome recycling factor		frr	TIGR00496
1-deoxy-D-xylulose 5-phosphate reductoisomerase	1.1.1.267	dxr	TIGR00243
di-trans,poly-cis-decaprenylcistransferase	2.5.1.31	uppS	TIGR00055
phosphatidate cytidylyltransferase domain protein	2.7.7.41	cdsA	UniRef100_P0ABG2
phosphatidate cytidylyltransferase	2.7.7.41	cdsA	UniRef100_P0ABG2
RIP metalloprotease RseP	3.4.24.-	rseP	TIGR00054
outer membrane assembly complex, YaeT protein		yaeT	TIGR03303
chaperone protein skp		skp	UniRef100_Q57T30
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	2.3.1.-	lpxD	TIGR01853
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ	4.2.1.-	fabZ	TIGR01750
acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase	2.3.1.129	lpxA	TIGR01852
lipid-A-disaccharide synthase	2.4.1.182	lpxB	TIGR00215
ribonuclease HII	3.1.26.4	rnhB	UniRef100_A7ZHS3
DNA polymerase III subunit alpha	2.7.7.7	dnaE	UniRef100_P10443
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit	6.4.1.2	accA	TIGR00513
lysine decarboxylase, constitutive	4.1.1.18	ldcC	UniRef100_P52095
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein			PF00903.20
tRNA(Ile)-lysidine synthase	6.3.4.-	tilS	UniRef100_P52097
protein rof		rof	UniRef100_P0AFW8
conserved hypothetical protein			UniRef100_A7ZHT0
conserved hypothetical protein			UniRef100_P0AA97
peptidyl-tRNA hydrolase domain protein			UniRef100_Q885L4
lipoprotein NlpE		nlpE	UniRef100_P40710
nlpC/P60 family protein			PF00877.14
proline--tRNA ligase	6.1.1.15	proS	TIGR00409
conserved hypothetical protein			UniRef100_P28634
protein rcsF		rcsF	UniRef100_P69412
D-methionine-binding lipoprotein metQ		metQ	UniRef100_P28635
D-methionine transport system permease protein metI		metI	UniRef100_P31547
D-methionine ABC transporter, ATP-binding protein	3.6.3.-	metN	TIGR02314
D,D-heptose 1,7-bisphosphate phosphatase	3.1.3.-	gmhB	UniRef100_P63229
			
			
			
			
conserved hypothetical protein			UniRef100_P30864
2,5-diketo-D-gluconic acid reductase B	1.1.1.274	dkgB	UniRef100_P30863
endonuclease/Exonuclease/phosphatase family protein			PF03372.18
methyltransferase domain protein			PF08242.7
membrane-bound lytic murein transglycosylase D	4.2.2.n1	mltD	UniRef100_P0AEZ8
hydroxyacylglutathione hydrolase	3.1.2.6	gloB	TIGR03413
RNase H family protein			PF00075.19
methyltransferase domain protein			PF08241.7
DNA polymerase III, epsilon subunit	2.7.7.7	dnaQ	TIGR01406
putative aminopeptidase			UniRef100_P77339
			
			
H repeat-associated yhhI domain protein		yhhI	UniRef100_P28912
carbon-nitrogen hydrolase family protein			PF00795.17
inhibitor of vertebrate lysozyme		ivy	UniRef100_P0AD60
acyl-CoA dehydrogenase, C-terminal domain protein			PF00441.19
phosphoheptose isomerase	5.3.1.28	gmhA	TIGR00441
L,D-transpeptidase catalytic domain protein			PF03734.9
glutamine amidotransferase domain protein			PF13522.1
mRNA interferase YafQ	3.1.-.-	yafQ	UniRef100_Q47149
antitoxin DinJ		dinJ	UniRef100_Q47150
			
conserved hypothetical protein			UniRef100_Q47151
conserved hypothetical protein			UniRef100_Q47152
FHIPEP family protein			PF00771.15
ompA family protein			PF00691.15
DNA polymerase IV	2.7.7.7	dinB	UniRef100_B1J100
antitoxin YafN		yafN	UniRef100_Q47156
mRNA interferase YafO	3.1.-.-	yafO	UniRef100_Q47157
acetyltransferase family protein			PF00583.19
conserved hypothetical protein			PF01139.12
putative peptide chain release factor H			TIGR03072
aminoacyl-histidine dipeptidase		pepD	UniRef100_P15288
xanthine phosphoribosyltransferase	2.4.2.22	gpt	UniRef100_A7ZHZ7
alpha/beta hydrolase family protein			PF12697.2
sigma factor-binding protein crl		crl	UniRef100_C4ZT97
outer membrane pore protein E		phoE	UniRef100_P02932
glutamate 5-kinase	2.7.2.11	proB	UniRef100_A7ZI01
gamma-glutamyl phosphate reductase	1.2.1.41	proA	UniRef100_C4ZTA0
toxin YkfI		ykfI	UniRef100_P77692
putative antitoxin YfjZ			UniRef100_P52141
conserved hypothetical protein			PF06174.6
conserved hypothetical protein			UniRef100_Q47685
intergenic-region protein			UniRef100_Q8VRA1
conserved hypothetical protein			UniRef100_P75677
conserved hypothetical protein			UniRef100_P77162
conserved hypothetical protein			UniRef100_P77365
putative membrane protein			TMHMM
conserved hypothetical protein			PF06067.6
50S ribosome-binding GTPase family protein			PF01926.18
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
HTH-like domain protein			PF13276.1
reverse transcriptase family protein			PF00078.22
transposase DDE domain protein			PF01609.16
amino acid permease family protein			PF00324.16
homocysteine S-methyltransferase	2.1.1.10	mmuM	UniRef100_Q47690
ABC transporter family protein			PF00005.22
binding--dependent transport system inner membrane component family protein			PF00528.17
putative transposase			PF03400.8
			
transposase family protein			PF01527.15
putative antitoxin YfjZ			UniRef100_P52141
conserved hypothetical protein			UniRef100_P37007
conserved hypothetical protein			UniRef100_P75682
conserved hypothetical protein			UniRef100_P39358
inner membrane symporter yicJ		yicJ	UniRef100_P31435
beta-xylosidase	3.2.1.37	xynB	UniRef100_P94489
bacterial transcriptional regulator family protein			PF01614.13
ornithine carbamoyltransferase	2.1.3.3	argF	TIGR00658
putative transposase			PF03400.8
			
putative cP4-6 prophage; predicted protein			UniRef100_P77169
conserved hypothetical protein			UniRef100_P52125
resolvase, N terminal domain protein			PF00239.16
conserved hypothetical protein			UniRef100_P71296
conserved hypothetical protein			UniRef100_C4LDJ6
			
phage integrase family protein			PF00589.17
			
xdhC and CoxI family protein			PF02625.11
molybdopterin-binding domain of aldehyde dehydrogenase family protein			PF02738.13
FAD binding domain in molybdopterin dehydrogenase family protein			PF00941.16
putative xanthine dehydrogenase yagT iron-sulfur-binding subunit			UniRef100_P77165
inner membrane protein yagU		yagU	UniRef100_P0AAA2
gram-negative pili assembly chaperone, N-terminal domain protein			PF00345.15
putative receptor			UniRef100_P77694
conserved hypothetical protein			UniRef100_P77802
conserved hypothetical protein			UniRef100_A7ZI26
fimbrillin matB		matB	UniRef100_P0C8Z9
bacterial regulatory s, luxR family protein			PF00196.14
ribosomal protein L31		rpmE	TIGR00105
conserved hypothetical protein			PF11924.3
transposase family protein			PF01527.15
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
integrase core domain protein			PF00665.21
inner membrane protein ykgB		ykgB	UniRef100_P75685
conserved hypothetical protein			PF07338.8
pyridine nucleotide-disulfide oxidoreductase family protein			PF07992.9
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
conserved hypothetical protein			UniRef100_F4VRM7
cysteine-rich domain protein			PF02754.11
iron-sulfur cluster-binding protein			TIGR00273
conserved hypothetical protein			PF02589.10
G-rich domain on tyrosine kinase family protein			PF13807.1
choline dehydrogenase	1.1.99.1	betA	TIGR01810
betaine aldehyde dehydrogenase	1.2.1.8	betB	TIGR01804
transcriptional repressor BetI		betI	TIGR03384
transporter, betaine/carnitine/choline transporter family protein			TIGR00842
cyclic di-GMP phosphodiesterase yahA	3.1.4.-	yahA	UniRef100_P21514
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			PF06496.6
ankyrin repeat family protein			PF00023.25
conserved hypothetical protein			UniRef100_B3XFB0
conserved hypothetical protein			PF11392.3
coA binding domain protein			PF02629.14
conserved hypothetical protein			PF06545.6
conserved hypothetical protein			UniRef100_D3QJ88
carbamate kinase	2.7.2.2	cpkA	UniRef100_P95474
amidohydrolase family protein			PF07969.6
conserved hypothetical protein			UniRef100_P75691
conserved hypothetical protein			UniRef100_P77393
conserved hypothetical protein			UniRef100_D8AQ20
homoserine/Threonine efflux family protein			TIGR00949
conserved hypothetical protein			PF07338.8
propionate catabolism operon regulatory protein PrpR		prpR	TIGR02329
			
methylisocitrate lyase	4.1.3.30	prpB	TIGR02317
2-methylcitrate synthase/citrate synthase II family protein			TIGR01800
2-methylcitrate dehydratase	4.2.1.79	prpD	TIGR02330
propionate--CoA ligase	6.2.1.17	prpE	TIGR02316
cytosine permease		codB	UniRef100_P0AA83
cytosine deaminase	3.5.4.1	codA	UniRef100_P25524
HTH-type transcriptional regulator CynR		cynR	UniRef100_P27111
carbonic anhydrase 1	4.2.1.1	cynT	UniRef100_P0ABF0
cyanate hydratase	4.2.1.104	cynS	TIGR00673
cyanate transporter family protein			TIGR00896
galactoside O-acetyltransferase	2.3.1.18	lacA	UniRef100_P07464
lactose permease		lacY	UniRef100_P02920
beta-galactosidase	3.2.1.23	lacZ	UniRef100_P00722
lactose operon repressor		lacI	UniRef100_P03023
bacterial transcriptional regulator family protein			PF01614.13
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	1.14.13.n3	mhpA	UniRef100_B1XBJ4
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase	1.13.11.16	mhpB	UniRef100_P17295
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase	3.7.1.n1	mhpC	UniRef100_B1XBJ6
2-keto-4-pentenoate hydratase	4.2.1.80	mhpD	UniRef100_P77608
acetaldehyde dehydrogenase	1.2.1.10		TIGR03215
4-hydroxy-2-oxovalerate aldolase	4.1.3.39	dmpG	TIGR03217
sugar (and other) transporter family protein			PF00083.19
conserved hypothetical protein			PF09831.4
S-formylglutathione hydrolase	3.1.2.12	fghA	TIGR02821
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	1.1.1.284		TIGR02818
transcriptional repressor frmR		frmR	UniRef100_A7ZIA5
putative predicted acyl transferase			UniRef100_Q47534
bacterial transferase hexapeptide family protein			PF00132.19
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
glycosyl transferase 2 family protein			PF00535.21
glcNAc-PI de-N-acetylase family protein			PF02585.12
taurine ABC transporter, periplasmic binding protein		tauA	TIGR01729
ABC transporter family protein			PF00005.22
binding--dependent transport system inner membrane component family protein			PF00528.17
alpha-ketoglutarate-dependent taurine dioxygenase	1.14.11.17	tauD	UniRef100_P37610
delta-aminolevulinic acid dehydratase	4.2.1.24	hemB	UniRef100_P0ACB2
putative predicted protein			UniRef100_B1XEW1
conserved hypothetical protein			UniRef100_A7ZX17
integrase core domain protein			PF00665.21
transposase family protein			PF01527.15
outer membrane autotransporter barrel domain protein			TIGR01414
putative dNA-binding transcriptional regulator			UniRef100_E2QGC0
beta-lactamase family protein			PF00144.19
putative hypothe			UniRef100_E2WRB8
protein sbmA		sbmA	UniRef100_P0AFY7
conserved hypothetical protein			PF07759.7
inner membrane protein yaiY		yaiY	UniRef100_P0AAP9
conserved hypothetical protein			PF10953.3
D-alanine--D-alanine ligase A	6.3.2.4	ddlA	UniRef100_P0A1F1
anti-adapter protein iraP		iraP	UniRef100_A7ZID1
alkaline phosphatase	3.1.3.1	phoA	UniRef100_P00634
phosphate starvation-inducible protein psiF		psiF	UniRef100_P0AFM5
putative diguanylate cyclase AdrA			UniRef100_P0AAP2
pyrroline-5-carboxylate reductase	1.5.1.2	proC	TIGR00112
conserved hypothetical protein			UniRef100_A7ZID6
shikimate kinase 2	2.7.1.71	aroL	UniRef100_A7ZID7
conserved hypothetical protein			UniRef100_P0AAN7
aroM family protein			PF07302.6
conserved hypothetical protein			UniRef100_Q1ICG2
conserved hypothetical protein			PF10971.3
recombination-associated protein rdgC		rdgC	UniRef100_A7ZIE2
fructokinase	2.7.1.4	mak	UniRef100_P23917
conserved hypothetical protein			PF12035.3
protein AraJ		araJ	UniRef100_P23910
nuclease sbcCD subunit C		sbcC	UniRef100_P13458
nuclease sbcCD subunit D		sbcD	UniRef100_P0AG77
phosphate regulon transcriptional regulatory protein PhoB		phoB	TIGR02154
phosphate regulon sensor kinase PhoR	2.7.3.-	phoR	TIGR02966
branched-chain amino acid transport system II carrier protein		brnQ	TIGR00796
proline-specific permease ProY		proY	UniRef100_P0AAE4
alpha amylase, catalytic domain protein			PF00128.19
conserved hypothetical protein			PF04336.7
tRNA ribosyltransferase-isomerase	5.-.-.-	queA	TIGR00113
queuine tRNA-ribosyltransferase	2.4.2.29	tgt	TIGR00430
preprotein translocase, YajC subunit		yajC	TIGR00739
-export membrane protein SecD		secD	TIGR01129
protein translocase subunit SecF		secF	UniRef100_P0AG95
HNH endonuclease family protein			PF01844.18
nucleoside-specific channel-forming protein tsx		tsx	UniRef100_P0A928
conserved hypothetical protein			UniRef100_P46122
transcriptional regulator NrdR		nrdR	TIGR00244
riboflavin biosynthesis protein RibD	3.5.4.26	ribD	TIGR00326
6,7-dimethyl-8-ribityllumazine synthase	6.3.3.-	ribH	TIGR00114
transcription antitermination factor NusB		nusB	TIGR01951
thiamine-monophosphate kinase	2.7.4.16	thiL	TIGR01379
phosphatidylglycerophosphatase A	3.1.3.27	pgpA	UniRef100_P18200
aldo/keto reductase family protein			PF00248.16
1-deoxy-D-xylulose-5-phosphate synthase	2.2.1.7	dxs	TIGR00204
farnesyl diphosphate synthase	2.5.1.10	ispA	UniRef100_P22939
exodeoxyribonuclease VII, small subunit	3.1.11.6	xseB	TIGR01280
tRNA sulfurtransferase ThiI	2.8.1.4	thiI	TIGR00342
chaperone protein YajL		yajL	UniRef100_Q46948
2-dehydropantoate 2-reductase	1.1.1.169	panE	UniRef100_P0A9J4
conserved hypothetical protein			UniRef100_A7ZII0
inner membrane transport protein yajR		yajR	UniRef100_P77726
protoheme IX farnesyltransferase	2.5.1.-	cyoE	TIGR01473
cytochrome o ubiquinol oxidase subunit IV	1.10.3.-	cyoD	TIGR02847
cytochrome o ubiquinol oxidase, subunit III	1.10.3.-	cyoC	TIGR02842
cytochrome o ubiquinol oxidase, subunit I	1.10.3.-	cyoB	TIGR02843
ubiquinol oxidase, subunit II	1.10.3.-	cyoA	TIGR01433
protein AmpG		ampG	UniRef100_P0AE17
conserved hypothetical protein			PF03923.8
protein BolA		bolA	UniRef100_P0ABE3
putative predicted protein			UniRef100_D6J7D5
trigger factor	5.2.1.8	tig	TIGR00115
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	3.4.21.92	clpP	TIGR00493
ATP-dependent Clp protease, ATP-binding subunit ClpX		clpX	TIGR00382
ATP-dependent protease La	3.4.21.53	lon	TIGR00763
DNA-binding protein HU-beta		hupB	UniRef100_P0ACF6
peptidyl-prolyl cis-trans isomerase D	5.2.1.8	ppiD	UniRef100_P0ADY2
competence ComEA helix-hairpin-helix repeat region domain protein			TIGR00426
long-chain acyl-CoA thioesterase tesC	3.1.2.-	tesC	UniRef100_P77712
queuosine biosynthesis protein QueC		queC	TIGR00364
bacterial extracellular solute-binding s, 5 Middle family protein			PF00496.17
HMP-PP phosphatase	3.6.1.-	cof	UniRef100_C4ZTK3
asnC family protein			PF01037.16
ABC transporter family protein			PF00005.22
multidrug resistance-like ATP-binding protein MdlB	3.6.3.44	mdlB	UniRef100_P0AAG7
nitrogen regulatory protein P-II 2		glnK	UniRef100_P0AC57
ammonia channel		amtB	UniRef100_P69680
acyl-CoA thioesterase II	3.1.2.-	tesB	TIGR00189
conserved hypothetical protein			UniRef100_P77717
O6-methylguanine-DNA methyltransferase			UniRef100_A6B4U8
conserved hypothetical protein			UniRef100_P0AAQ8
EAL domain protein			PF00563.15
inner membrane protein ylaC		ylaC	UniRef100_P0AAS1
maltose O-acetyltransferase	2.3.1.79	maa	UniRef100_P77791
hemolysin expression-modulating protein		hha	UniRef100_P0ACE5
biofilm formation regulator YbaJ family protein			PF10757.4
acriflavine resistance protein B		acrB	UniRef100_P31224
acriflavine resistance protein A		acrA	UniRef100_P0AE07
HTH-type transcriptional regulator AcrR		acrR	UniRef100_P0ACT0
potassium efflux system KefA		kefA	UniRef100_P77338
conserved hypothetical protein			PF10689.4
primosomal replication protein N''		priC	UniRef100_P23862
inner membrane protein ybaN		ybaN	UniRef100_P0AAR6
adenine phosphoribosyltransferase	2.4.2.7	apt	TIGR01090
DNA polymerase III, subunit gamma and tau	2.7.7.7	dnaX	TIGR02397
DNA-binding protein, YbaB/EbfC family			TIGR00103
recombination protein RecR		recR	TIGR00615
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein			PF02518.21
adenylate kinase	2.7.4.3	adk	UniRef100_A7ZIN4
acetyl esterase	3.1.1.-	aes	UniRef100_B7NIF4
ferrochelatase	4.99.1.1	hemH	TIGR00109
inosine-guanosine kinase	2.7.1.73	gsk	UniRef100_P0AEW8
inner membrane protein ybaL		ybaL	UniRef100_P39830
fosmidomycin resistance protein		fsr	UniRef100_P52067
protein UshA	3.1.3.5	ushA	UniRef100_P07024
cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK		ybaK	UniRef100_P0AAR3
traB family protein			PF01963.12
addiction module antidote protein, HigA family		higA	TIGR02607
copper-translocating P-type ATPase	3.6.3.4		TIGR01511
glutaminase A	3.5.1.2	glsA	TIGR03814
inner membrane transport protein YbaT		ybaT	UniRef100_P77400
cu(I)-responsive transcriptional regulator		cueR	TIGR02044
inner membrane protein ybbJ		ybbJ	UniRef100_P0AAS3
protein QmcA		qmcA	UniRef100_P0AA55
conserved hypothetical protein			UniRef100_P77279
conserved hypothetical protein			UniRef100_P77307
conserved hypothetical protein			UniRef100_P77395
short chain dehydrogenase family protein			PF00106.20
GDSL-like Lipase/Acylhydrolase family protein			PF00657.17
ABC transporter family protein			PF00005.22
ftsX-like permease family protein			PF02687.16
RHS repeat-associated core domain protein			TIGR03696
conserved hypothetical protein			UniRef100_P33668
RHS repeat-associated core domain protein			TIGR03696
			
helix-turn-helix domain protein			PF13518.1
tRNA 2-selenouridine synthase	2.9.1.-	selU	TIGR03167
HTH-type transcriptional activator AllS		allS	UniRef100_P0ACR1
ureidoglycolate hydrolase	3.5.3.19	allA	UniRef100_C4ZUV5
acetate operon repressor		iclR	UniRef100_P16528
glyoxylate carboligase	4.1.1.47	gcl	TIGR01504
hydroxypyruvate isomerase	5.3.1.22	hyi	TIGR03234
2-hydroxy-3-oxopropionate reductase	1.1.1.60		TIGR01505
putative allantoin permease			UniRef100_P75712
allantoinase	3.5.2.5	allB	TIGR03178
putative purine permease ybbY			UniRef100_P77328
glycerate kinase 1	2.7.1.31	glxK	UniRef100_P77364
conserved hypothetical protein			UniRef100_P75713
allantoate amidohydrolase	3.5.3.9	allC	TIGR03176
ureidoglycolate dehydrogenase	1.1.1.154	allD	TIGR03175
protein fdrA		fdrA	UniRef100_Q47208
conserved hypothetical protein			UniRef100_C7CPJ1
conserved hypothetical protein			PF06545.6
conserved hypothetical protein			PF11392.3
carbamate kinase	2.7.2.2	arcC	TIGR00746
phosphoribosylaminoimidazole carboxylase, ATPase subunit	4.1.1.21	purK	TIGR01161
N5-carboxyaminoimidazole ribonucleotide mutase	5.4.99.18	purE	UniRef100_P0AG19
UDP-2,3-diacylglucosamine hydrolase	3.6.1.-	lpxH	TIGR01854
peptidyl-prolyl cis-trans isomerase B	5.2.1.8	ppiB	UniRef100_P23869
cysteine--tRNA ligase	6.1.1.16	cysS	TIGR00435
inner membrane protein ybcI		ybcI	UniRef100_P45570
conserved hypothetical protein			UniRef100_P0AAS7
bifunctional protein FolD	3.5.4.9	folD	UniRef100_B7M4N2
type-1 fimbrial protein, A chain		fimA	UniRef100_P37921
chaperone protein fimC		fimC	UniRef100_P31697
type VII secretion system (T7SS), usher family protein			PF00577.15
fimbrial family protein			PF00419.15
putative fimbrial protein			UniRef100_P38052
bacterial regulatory s, luxR family protein			PF00196.14
putative predicted protein			UniRef100_D6ILD6
phage integrase family protein			PF00589.17
exonuclease domain protein	3.1.11.3	exo	UniRef100_P03697
replication P family protein			PF06992.6
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
multidrug transporter emrE		emrE	UniRef100_P23895
recombinase family protein			PF07508.8
			
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
putative dLP12 prophage; DNA base-flipping protein			UniRef100_Q47269
			
conserved hypothetical protein			PF07102.7
crossover junction endodeoxyribonuclease rusA	3.1.22.4	rusA	UniRef100_A1AA51
phage antitermination Q family protein			PF06530.7
			
transposase DDE domain protein			PF01609.16
outer membrane porin protein ompD		ompD	UniRef100_Q57P83
lysis S family protein			PF04971.7
putative lysozyme from lambdoid prophage DLP12			UniRef100_P78285
bacteriophage lysis family protein			PF03245.8
lipoprotein bor		bor	UniRef100_P26814
			
conserved hypothetical protein			UniRef100_P64436
terminase small subunit		Nu1	UniRef100_P03707
caudovirales tail fibre assembly family protein			PF02413.12
			
caudovirales tail fibre assembly family protein			PF02413.12
HTH-type transcriptional regulator AppY		appY	UniRef100_P05052
protease 7	3.4.23.49	ompT	UniRef100_P09169
HTH-type transcriptional regulator AdiY		adiY	UniRef100_P33234
putative n5-glutamine methyltransferase			UniRef100_P37325
TPR repeat family protein			PF13414.1
type II secretion system (T2SS), E, N-terminal domain protein			PF05157.10
sensor kinase CusS	2.7.13.3	cusS	UniRef100_P77485
transcriptional regulatory protein CusR		cusR	UniRef100_P0AD00
putative predicted protein			UniRef100_D6J7P4
cation efflux system protein CusC		cusC	UniRef100_P77211
cation efflux system protein CusF		cusF	UniRef100_P77214
cation efflux system protein CusB		cusB	UniRef100_P77239
cation efflux system protein CusA		cusA	UniRef100_P38054
phenylalanine-specific permease		pheP	UniRef100_P24207
miniconductance mechanosensitive channel		mscM	UniRef100_P0AAT4
oxygen-insensitive NAD(P)H nitroreductase	1.5.1.34	nfnB	UniRef100_P38489
conserved hypothetical protein			PF04237.8
conserved hypothetical protein			PF06643.6
carboxylate-amine ligase YbdK	6.3.-.-	ybdK	UniRef100_C4ZV25
			
hok/gef family protein			PF01848.11
transposase DDE domain protein			PF01609.16
4'-phosphopantetheinyl transferase superfamily protein			PF01648.15
ferrienterobactin receptor		fepA	UniRef100_P05825
enterochelin esterase		fes	UniRef100_E3Y920
mbtH-like family protein			PF03621.8
enterobactin synthase component F	2.7.7.-	entF	UniRef100_P11454
ABC transporter family protein			PF00005.22
ferric enterobactin transport protein fepE		fepE	UniRef100_P26266
ferric enterobactin transport system permease protein fepG		fepG	UniRef100_P23877
ferric enterobactin transport system permease protein fepD		fepD	UniRef100_P23876
enterobactin exporter EntS		entS	UniRef100_C4ZV37
ferrienterobactin-binding periplasmic protein		fepB	UniRef100_P0AEL7
isochorismate synthase entC	5.4.4.2	entC	UniRef100_P0AEJ3
(2,3-dihydroxybenzoyl)adenylate synthase	2.7.7.58		TIGR02275
isochorismatase	3.3.2.1	entB	UniRef100_P0ADI5
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	1.3.1.28	entA	UniRef100_P15047
esterase YbdB	3.1.-.-	ybdB	UniRef100_P0A8Y9
carbon starvation protein A		cstA	UniRef100_P15078
conserved hypothetical protein			PF04328.8
iron-containing alcohol dehydrogenase family protein			PF13685.1
aminotransferase YbdL	2.6.1.-	ybdL	UniRef100_P77806
parB-like nuclease domain protein			PF02195.13
conserved hypothetical protein			PF11922.3
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
thioredoxin family protein			PF13462.1
peroxiredoxin	1.11.1.15	ahpC	TIGR03137
alkyl hydroperoxide reductase, F subunit	1.8.1.-	ahpF	TIGR03140
universal stress protein G		uspG	UniRef100_P39177
zinc-binding dehydrogenase family protein			PF00107.21
conserved hypothetical protein			UniRef100_E7J412
prokaryotic transcription elongation factor GreA/GreB		rnk	UniRef100_Q82T10
ribonuclease I	3.1.27.6	rna	UniRef100_P21338
citrate carrier		citT	UniRef100_P0AE75
triphosphoribosyl-dephospho-CoA synthase CitG	2.7.8.25	citG	TIGR03125
holo-ACP synthase CitX	2.7.7.61	citX	TIGR03124
citrate lyase, alpha subunit	2.8.3.10	citF	TIGR01584
citrate (pro-3S)-lyase, beta subunit	4.1.3.6	citE	TIGR01588
citrate lyase acyl carrier protein	4.1.3.6	citD	TIGR01608
[citrate (pro-3S)-lyase] ligase	6.2.1.22	citC	TIGR00124
sensor histidine kinase DpiB	2.7.13.3	dpiB	UniRef100_P77510
transcriptional regulatory protein DpiA		dpiA	UniRef100_P0AEF6
transporter, anaerobic C4-dicarboxylate uptake C family protein			TIGR00771
antimicrobial peptide resistance and lipid A acylation PagP family protein			PF07017.6
RNA chaperone, negative regulator of cspA transcription		cspE	UniRef100_D2TMR8
			
protein CrcB		crcB	UniRef100_C4ZWB3
putative amidase			UniRef100_E2X9K2
carbon-nitrogen hydrolase family protein			PF00795.17
twin arginine-targeting translocase, TatA/E family protein		tatA	TIGR01411
lipoyl synthase	2.8.1.8	lipA	TIGR00510
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
lipoyl(octanoyl) transferase	2.3.1.181	lipB	TIGR00214
conserved hypothetical protein			UniRef100_A7ZJ19
D-alanyl-D-alanine carboxypeptidase dacA	3.5.2.6	dacA	UniRef100_P0AEB4
rare lipoprotein A		rlpA	UniRef100_P10100
rod shape-determining protein RodA		mrdB	TIGR02210
penicillin-binding protein 2		mrdA	TIGR03423
rRNA large subunit m3Psi methyltransferase RlmH	2.1.-.-	rlmH	TIGR00246
conserved hypothetical protein			UniRef100_P0AAT7
alpha-ribazole phosphatase	3.1.3.73	cobC	TIGR03162
nicotinate (nicotinamide) nucleotide adenylyltransferase	2.7.7.18	nadD	TIGR00482
DNA polymerase III, delta subunit	2.7.7.7	holA	TIGR01128
LPS-assembly lipoprotein lptE		lptE	UniRef100_A7ZJ30
leucine--tRNA ligase	6.1.1.4	leuS	TIGR00396
conserved hypothetical protein			PF07295.6
sel1 repeat family protein			PF08238.7
conserved hypothetical protein			PF06889.6
dnaJ domain protein			PF00226.26
sel1 repeat family protein			PF08238.7
conserved hypothetical protein			PF06889.6
dnaJ domain protein			PF00226.26
hsp70 family protein			PF00012.15
pyrimidine-specific ribonucleoside hydrolase rihA	3.2.-.-	rihA	UniRef100_C4ZWD8
ABC transporter family protein			PF00005.22
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein			TIGR01726
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein			TIGR01726
			
glutamate/aspartate periplasmic-binding protein		gltI	UniRef100_P37902
transposase DDE domain protein			PF01609.16
apolipoprotein N-acyltransferase	2.3.1.-	lnt	TIGR00546
magnesium and cobalt efflux protein CorC		corC	UniRef100_P0A2L4
putative rRNA maturation factor YbeY			UniRef100_A7ZJ51
phoH-like protein		ybeZ	UniRef100_P0A9K5
tRNA-i(6)A37 thiotransferase enzyme MiaB	2.-.-.-	miaB	TIGR01574
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	1.14.13.-	ubiF	UniRef100_P75728
asparagine synthase	6.3.5.4	asnB	TIGR01536
putative lipoprotein			UniRef100_E7TJD4
HAD hydrolase, IA, variant 1 family protein			TIGR01549
ROK family protein			PF00480.15
N-acetylglucosamine-6-phosphate deacetylase	3.5.1.25	nagA	TIGR00221
glucosamine-6-phosphate deaminase	3.5.99.6	nagB	TIGR00502
PTS system, N-acetylglucosamine-specific IIBC component	2.7.1.69	nagE	TIGR01998
glutamine--tRNA ligase	6.1.1.18	glnS	TIGR00440
outer membrane porin, OprD family protein			PF03573.8
ybfN-like lipofamily protein			PF13982.1
ferric uptake regulation protein		fur	UniRef100_P0A9B1
flavodoxin			TIGR01752
ribbon-helix-helix , copG family protein			PF01402.16
esterase ybfF	3.1.-.-	ybfF	UniRef100_P75736
protein seqA		seqA	UniRef100_P0AFY9
			
phosphoglucomutase, alpha-D-glucose phosphate-specific	5.4.2.2	pgm	TIGR01132
conserved hypothetical protein			UniRef100_B7NMP1
conserved hypothetical protein			PF10946.3
conserved hypothetical protein			PF10946.3
putrescine-ornithine antiporter		potE	UniRef100_P0AAF2
orn/Lys/Arg decarboxylase, N-terminal domain protein			PF03709.10
			
KDP operon transcriptional regulatory protein KdpE		kdpE	UniRef100_P21866
sensor protein KdpD	2.7.13.3	kdpD	UniRef100_P21865
K+-transporting ATPase, C subunit	3.6.3.12	kdpC	TIGR00681
K+-transporting ATPase, B subunit	3.6.3.12	kdpB	TIGR01497
K+-transporting ATPase, A subunit	3.6.3.12	kdpA	TIGR00680
K+-transporting ATPase, F subunit	3.6.3.12	kdpF	TIGR02115
conserved hypothetical protein			PF10725.4
protein rhsC		rhsC	UniRef100_P16918
			
RHS repeat-associated core domain protein			TIGR03696
conserved hypothetical protein			UniRef100_P28915
DDE_Tnp_1-associated family protein			PF13808.1
H repeat-associated protein yhhI		yhhI	UniRef100_P28912
H repeat-associated protein ydcC		ydcC	UniRef100_P28917
conserved hypothetical protein			PF08349.6
deoxyribodipyrimidine photo-lyase	4.1.99.3	phrB	UniRef100_P00914
dipeptide permease D		dtpD	UniRef100_Q8X9D3
conserved hypothetical protein			UniRef100_P0AFP8
allophanate hydrolase subunit 1 family protein			PF02682.11
conserved hypothetical protein			TIGR00724
conserved hypothetical protein			UniRef100_C4ZWI8
membrane AbrB duplication domain protein			TIGR03082
endonuclease 8	4.2.99.18	nei	UniRef100_C4ZWI9
fimbrial family protein			PF00419.15
chaperone protein papD		papD	UniRef100_P15319
type VII secretion system (T7SS), usher family protein			PF00577.15
fimbrial family protein			PF00419.15
citrate (Si)-synthase	2.3.3.1	gltA	TIGR01798
succinate dehydrogenase, cytochrome b556 subunit		sdhC	TIGR02970
succinate dehydrogenase, hydrophobic membrane anchor protein		sdhD	TIGR02968
succinate dehydrogenase, flavoprotein subunit		sdhA	TIGR01816
succinate dehydrogenase iron-sulfur subunit	1.3.99.1	sdhB	UniRef100_P07014
oxoglutarate dehydrogenase (succinyl-transferring), E1 component	1.2.4.2	sucA	TIGR00239
dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex	2.3.1.61	sucB	TIGR01347
succinyl-CoA ligase [ADP-forming] subunit beta	6.2.1.5	sucC	UniRef100_A7ZJA8
succinyl-CoA ligase [ADP-forming] subunit alpha	6.2.1.5	sucD	UniRef100_P0AGF1
mannosyl-D-glycerate transport/metabolism system repressor mngR		mngR	UniRef100_P13669
heat-responsive suppressor hrsA	2.7.1.69	hrsA	UniRef100_P54745
alpha-mannosidase mngB	3.2.1.-	mngB	UniRef100_P54746
			
cytochrome d ubiquinol oxidase subunit 1	1.10.3.-	cydA	UniRef100_P0ABK0
cytochrome d ubiquinol oxidase, subunit II	1.10.3.-	cydB	TIGR00203
cyd operon protein YbgE			TIGR02112
tol-pal system-associated acyl-CoA thioesterase	3.1.2.-	ybgC	TIGR02799
protein TolQ		tolQ	TIGR02796
protein TolR		tolR	TIGR02801
protein TolA		tolA	TIGR02794
tol-Pal system beta propeller repeat protein TolB		tolB	TIGR02800
peptidoglycan-associated lipoprotein		pal	TIGR02802
tol-pal system protein YbgF		ygbF	TIGR02795
quinolinate synthetase complex, A subunit	2.5.1.72	nadA	TIGR00550
zinc transporter zitB		zitB	UniRef100_P75757
nicotinamide riboside transporter pnuC		pnuC	UniRef100_P0AFK2
ybgS-like family protein			PF13985.1
3-deoxy-7-phosphoheptulonate synthase	2.5.1.54		TIGR00034
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	5.4.2.1	gpmA	UniRef100_B7ULM8
galactose mutarotase	5.1.3.-	galM	TIGR02636
galactokinase	2.7.1.6	galK	TIGR00131
galactose-1-phosphate uridylyltransferase	2.7.7.10	galT	TIGR00209
UDP-glucose 4-epimerase	5.1.3.2	galE	TIGR01179
ABC transporter family protein			PF00005.22
transcriptional regulator modE		modE	UniRef100_P0A9G9
molybdate ABC transporter, periplasmic molybdate-binding protein		modA	TIGR01256
molybdate ABC transporter, permease protein		modB	TIGR02141
molybdate ABC transporter, ATP-binding protein	3.6.3.29	modC	TIGR02142
cof-like hydrolase family protein			TIGR00099
lactonase, 7-bladed beta-propeller family protein			PF10282.4
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
prpF family protein			PF04303.8
inner membrane protein ybhI		ybhI	UniRef100_P75763
aconitase C-terminal domain protein			PF00694.14
putative acyl-CoA thioester hydrolase ybhC			UniRef100_P46130
conserved hypothetical protein			UniRef100_P12994
adenosylmethionine-8-amino-7-oxononanoate transaminase	2.6.1.62	bioA	TIGR00508
biotin synthase	2.8.1.6	bioB	TIGR00433
8-amino-7-oxononanoate synthase	2.3.1.47	bioF	TIGR00858
malonyl-CoA O-methyltransferase BioC	2.1.1.197	bioC	UniRef100_P12999
dethiobiotin synthase	6.3.3.3	bioD	TIGR00347
excinuclease ABC subunit B	3.1.25.-	uvrB	TIGR00631
conserved hypothetical family protein			TIGR01826
molybdenum cofactor biosynthesis protein A		moaA	TIGR02666
molybdenum cofactor biosynthesis protein B		moaB	TIGR02667
molybdenum cofactor biosynthesis protein C		moaC	TIGR00581
molybdopterin converting factor, subunit 1		moaD	TIGR01682
molybdopterin synthase catalytic subunit	2.-.-.-	moaE	UniRef100_P30749
inner membrane protein YbhL		ybhL	UniRef100_P0AAC5
inhibitor of apoptosis-promoting Bax1 family protein			PF01027.15
inner membrane protein ybhN		ybhN	UniRef100_P75770
putative cardiolipin synthase YbhO			UniRef100_P0AA85
endonuclease/Exonuclease/phosphatase family protein			PF03372.18
inner membrane transport permease ybhR		ybhR	UniRef100_P0AFQ0
inner membrane protein ybhQ		ybhQ	UniRef100_P0AAW7
inner membrane transport permease ybhS		ybhS	UniRef100_P0AFQ4
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
efflux transporter, RND family, MFP subunit			TIGR01730
bacterial regulatory s, tetR family protein			PF00440.18
ATP-dependent RNA helicase rhlE	3.6.4.13	rhlE	UniRef100_P25888
swarming motility protein ybiA		ybiA	UniRef100_P30176
DEAD/DEAH box helicase family protein			PF00270.24
glycosyl transferase family, helical bundle domain protein			PF02885.12
conserved hypothetical protein			UniRef100_P30178
multiple stress resistance protein BhsA		bhsA	UniRef100_P0AB42
conserved hypothetical protein			UniRef100_P41039
PKHD-type hydroxylase Sbal_3634	1.14.11.-		UniRef100_A3D8P6
catecholate siderophore receptor fiu		fiu	UniRef100_P75780
multiple stress resistance protein BhsA		bhsA	UniRef100_P0AB42
mechanosensitive ion channel family protein			PF00924.13
ribosomal RNA large subunit methyltransferase F	2.1.1.181	rlmF	UniRef100_C4ZXX9
ABC transporter family protein			PF00005.22
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein			TIGR01726
bacterial extracellular solute-binding s, 3 family protein			PF00497.15
DNA protection during starvation protein	1.16.-.-	dps	UniRef100_A7ZJM7
inner membrane transporter rhtA		rhtA	UniRef100_P0AA69
outer membrane protein X		ompX	UniRef100_P0A919
putative phosphoethanolamine transferase ybiP			UniRef100_P75785
transcriptional regulator mntR		mntR	UniRef100_P0A9F2
inner membrane protein YbiR		ybiR	UniRef100_P75788
putative L,D-transpeptidase YbiS			UniRef100_P0AAY0
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
conserved hypothetical protein			UniRef100_P75791
sugar phosphatase SupH	3.1.3.23	supH	UniRef100_P75792
glycyl radical enzyme, PFL2/glycerol dehydratase family protein			TIGR01774
glycyl-radical enzyme activating family protein	1.97.1.-		TIGR02494
fructose-6-phosphate aldolase	4.1.2.-	fsa	TIGR00875
molybdopterin synthase sulfurylase MoeB		moeB	TIGR02355
molybdopterin molybdenumtransferase	2.-.-.-	moeA	UniRef100_P12281
isoaspartyl peptidase	3.4.19.5	iaaA	UniRef100_P37595
nickel import ATP-binding protein NikE	3.6.3.24	nikE	TIGR02769
glutathione-binding protein gsiB		gsiB	UniRef100_P75797
glutathione transport system permease protein gsiC		gsiC	UniRef100_A1A970
glutathione transport system permease protein gsiD		gsiD	UniRef100_P75799
putative cyclic di-GMP phosphodiesterase YliE			UniRef100_P75800
diguanylate cyclase domain protein			TIGR00254
ribosomal protein S12 methylthiotransferase RimO		rimO	TIGR01125
biofilm formation family protein			PF10799.3
glutathione S-transferase, C-terminal domain protein			PF00043.20
soluble aldose sugar dehydrogenase yliI	1.1.5.-	yliI	UniRef100_P75804
D-alanyl-D-alanine carboxypeptidase dacC	3.4.16.4	dacC	UniRef100_P08506
deoxyribose operon repressor		deoR	UniRef100_P0ACK7
putative undecaprenyl-diphosphatase ybjG			UniRef100_P75806
multidrug transporter MdfA		mdfA	UniRef100_P0AEZ0
conserved hypothetical protein			UniRef100_P0AAY4
phosphatase YbjI	3.1.3.-	ybjI	UniRef100_P75809
inner membrane protein ybjJ		ybjJ	UniRef100_P75810
tetR-family transcriptional regulatory protein			UniRef100_D6EUD2
aspT/YidE/YbjL antiporter duplication domain protein			TIGR01625
inner membrane protein ybjM		ybjM	UniRef100_P64440
glutaredoxin, GrxA family		grxA	TIGR02183
conserved hypothetical protein			PF07214.7
oxygen-insensitive NADPH nitroreductase	1.-.-.-	nfsA	UniRef100_P17117
alpha-L-glutamate ligases, RimK family protein			TIGR00768
bacterial sensory transduction regulator family protein			PF10722.4
putrescine-binding periplasmic protein		potF	UniRef100_P31133
polyamine ABC transporter, ATP-binding family protein	3.6.3.31		TIGR01187
putrescine transport system permease protein PotH		potH	UniRef100_P31135
binding--dependent transport system inner membrane component family protein			PF00528.17
inner membrane protein ybjO		ybjO	UniRef100_P0AAZ2
23S rRNA (uracil-5-)-methyltransferase RumB	2.1.1.189	rumB	TIGR02085
ABC transporter arginine-binding protein 1		artJ	UniRef100_P30860
			
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein			TIGR01726
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein			TIGR01726
lysine-arginine-ornithine-binding periplasmic family protein			TIGR01096
arginine transport ATP-binding protein ArtP	3.6.3.-	artP	UniRef100_P0AAF8
conserved hypothetical protein			UniRef100_P75818
conserved hypothetical protein			UniRef100_A7ZJT5
NAD dependent epimerase/dehydratase family protein			PF01370.16
N-acetylmuramoyl-L-alanine amidase AmiD	3.5.1.28	amiD	UniRef100_P75820
short chain dehydrogenase family protein			PF00106.20
low specificity L-threonine aldolase	4.1.2.5	ltaE	UniRef100_P75823
pyruvate dehydrogenase [ubiquinone]	1.2.5.1	poxB	UniRef100_P07003
NADH oxidoreductase hcr	1.-.-.-	hcr	UniRef100_P75824
hydroxylamine reductase	1.-.-.-	hcp	TIGR01703
conserved hypothetical protein			PF03956.8
aquaporin Z		aqpZ	UniRef100_P60845
conserved hypothetical protein			PF04393.8
AAA domain protein			PF13304.1
macrolide-specific efflux protein macA		macA	UniRef100_P75830
macrolide export ATP-binding/permease protein MacB	3.6.3.-	macB	UniRef100_P75831
cold shock domain protein CspD		cspD	TIGR02381
ATP-dependent Clp protease adaptor ClpS family protein			PF02617.12
ATP-dependent Clp protease ATP-binding subunit ClpA		clpA	TIGR02639
translation initiation factor IF-1		infA	TIGR00008
leucyl/phenylalanyl-tRNA--protein transferase	2.3.2.6	aat	TIGR00667
thiol reductant ABC exporter, CydC subunit		cydC	TIGR02868
thiol reductant ABC exporter, CydD subunit		cydD	TIGR02857
thioredoxin-disulfide reductase	1.8.1.9	trxB	TIGR01292
leucine-responsive regulatory protein		lrp	UniRef100_P0ACJ2
DNA translocase ftsK		ftsK	UniRef100_P46889
outer membrane lipocarrier protein LolA		lolA	TIGR00547
replication-associated recombination protein A		rarA	UniRef100_P0AAZ6
serine--tRNA ligase	6.1.1.11	serS	TIGR00414
anaerobic dimethyl sulfoxide reductase chain A	1.8.99.-	dmsA	UniRef100_P18775
dimethylsulfoxide reductase, chain B		dmsB	TIGR02951
DMSO reductase anchor subunit family protein			PF04976.7
conserved hypothetical protein			UniRef100_P21367
sugar (and other) transporter family protein			PF00083.19
inner membrane transporter ycaM		ycaM	UniRef100_P75835
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
NADPH-dependent FMN reductase family protein			PF03358.10
pyruvate formate-lyase 1-activating enzyme	1.97.1.4	pflA	TIGR02493
formate acetyltransferase	2.3.1.54	pflB	TIGR01255
formate transporter FocA		focA	TIGR04060
conserved hypothetical protein			TIGR00702
conserved hypothetical protein			PF04239.7
phosphoserine transaminase	2.6.1.52	serC	TIGR01364
3-phosphoshikimate 1-carboxyvinyltransferase	2.5.1.19	aroA	TIGR01356
peptidase M48 family protein			PF01435.13
cytidylate kinase	2.7.4.14	cmk	TIGR00017
ribosomal protein S1		rpsA	TIGR00717
integration host factor, beta subunit		ihfB	TIGR00988
DNA internalization-related competence protein ComEC/Rec2			TIGR00361
lipid A export permease/ATP-binding protein MsbA		msbA	TIGR02203
tetraacyldisaccharide 4'-kinase	2.7.1.130	lpxK	TIGR00682
conserved hypothetical protein			UniRef100_P75843
trm112p-like family protein			PF03966.11
3-deoxy-D-manno-octulosonate cytidylyltransferase	2.7.7.38	kdsB	TIGR00466
conserved hypothetical protein			PF02698.12
conserved hypothetical protein			UniRef100_P0AB04
protein smtA		smtA	UniRef100_P36566
chromosome partition protein mukF		mukF	UniRef100_A7ZK12
chromosome partition protein mukE		mukE	UniRef100_P22524
chromosome partition protein mukB		mukB	UniRef100_C4ZQ50
putative L,D-transpeptidase YcbB			UniRef100_P22525
conserved hypothetical protein			PF05951.8
metallo-beta-lactamase superfamily protein			PF00753.22
aspartate aminotransferase	2.6.1.1	aspC	UniRef100_P00509
outer membrane protein F		ompF	UniRef100_P02931
asparagine--tRNA ligase	6.1.1.22	asnS	TIGR00457
nicotinate phosphoribosyltransferase	2.4.2.11	pncB	TIGR01514
aminopeptidase N	3.4.11.2	pepN	TIGR02414
aliphatic sulfonates import ATP-binding protein SsuB	3.6.3.-	ssuB	UniRef100_P0AAI2
putative aliphatic sulfonates transport permease protein ssuC			UniRef100_P75851
alkanesulfonate monooxygenase, FMNH(2)-dependent	1.14.14.5	ssuD	TIGR03565
putative aliphatic sulfonates-binding protein			UniRef100_P75853
FMN reductase		ssuE	TIGR03567
fimbrial family protein			PF00419.15
chaperone protein focC		focC	UniRef100_P62609
type VII secretion system (T7SS), usher family protein			PF00577.15
fimbrial family protein			PF00419.15
fimbrial family protein			PF00419.15
fimbrial family protein			PF00419.15
gram-negative pili assembly chaperone, C-terminal domain protein			PF02753.12
dihydroorotate dehydrogenase	1.3.98.1	pyrD	TIGR01036
conserved hypothetical protein			UniRef100_P75863
conserved hypothetical protein			PF07126.7
ribosomal RNA large subunit methyltransferase L	2.1.1.173	rlmL	UniRef100_B1X8Q2
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
integral membrane , PqiA family protein			TIGR00155
mce related family protein			PF02470.15
conserved hypothetical protein			PF03886.8
			
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA	4.2.1.60	fabA	TIGR01749
AAA domain protein			PF13654.1
organiser of macrodomain of Terminus of chromosome family protein			PF06303.7
outer membrane protein A		ompA	UniRef100_P0A911
cell division inhibitor sulA		sulA	UniRef100_Q1JQN1
inner membrane protein yccS		yccS	UniRef100_P75870
protein sxy		sxy	UniRef100_P75869
inner membrane protein yccF		yccF	UniRef100_P0AB12
helicase IV	3.6.4.12	helD	UniRef100_P15038
methylglyoxal synthase	4.2.3.3	mgsA	TIGR00160
conserved hypothetical protein			UniRef100_A7ZK68
putative predicted protein			UniRef100_D6IM37
conserved hypothetical protein			UniRef100_P75874
hemimethylated DNA binding domain protein			TIGR02097
ribosomal RNA large subunit methyltransferase I	2.1.1.191	rlmI	UniRef100_C4ZQ93
sulfur relay , TusE/DsrC/DsvC family protein		tusE	TIGR03342
acylphosphatase	3.6.1.7	yccX	UniRef100_P0AB66
modulator of FtsH protease YccA		yccA	UniRef100_P0AAC7
hydrogenase-1 small chain	1.12.99.6	hyaA	UniRef100_P69740
hydrogenase-1 large chain	1.12.99.6	hyaB	UniRef100_P0ACD8
ni/Fe-hydrogenase, b-type cytochrome subunit		cybH	TIGR02125
hydrogenase expression/formation protein	3.4.23.-	hybD	TIGR00140
hydrogenase-1 operon protein hyaE		hyaE	UniRef100_P19931
hupH hydrogenase expression , C-terminal conserved region family protein			PF04809.8
cytochrome bd-II oxidase subunit 1	1.10.3.-	appC	UniRef100_P26459
cytochrome d ubiquinol oxidase, subunit II	1.10.3.-	cydB	TIGR00203
periplasmic AppA protein	3.1.3.26	appA	UniRef100_P07102
tyrosine-protein kinase etk	2.7.10.-	etk	UniRef100_P38134
low molecular weight protein-tyrosine-phosphatase etp	3.1.3.48	etp	UniRef100_P0ACZ3
putative outer membrane lipoprotein Wza			UniRef100_Q9X4B7
conserved hypothetical protein			PF06082.6
putative protein			UniRef100_B7UN63
conserved hypothetical protein			UniRef100_P75884
hypothetical protein			default
			
putative transposase			PF03400.8
RNA chaperone, negative regulator of cspA transcription		cspE	UniRef100_D2TMR8
cold shock-like protein CspG		cspG	UniRef100_P0A980
			
gnsA/GnsB family protein			PF08178.6
putative electron transport protein yccM			UniRef100_P52636
TMAO reductase sytem sensor TorS	2.7.13.3	torS	TIGR02956
torCAD operon transcriptional regulatory protein torR		torR	UniRef100_P38684
TMAO reductase system periplasmic protein TorT		torT	TIGR02955
trimethylamine-N-oxide reductase c-type cytochrome TorC		torC	TIGR02162
trimethylamine-N-oxide reductase TorA	1.7.2.3	torA	TIGR02164
chaperone protein torD		torD	UniRef100_P36662
chaperone modulatory protein CbpM		cbpM	UniRef100_A7ZKA4
curved DNA-binding protein		cbpA	UniRef100_C4ZQC8
conserved hypothetical protein			UniRef100_P36661
glucose-1-phosphatase	3.1.3.10	agp	UniRef100_P19926
yccJ-like family protein			PF13993.1
quinone oxidoreductase, type IV	1.6.5.2	wrbA	TIGR01755
			
			
pyrimidine utilization transport protein G		rutG	TIGR03616
pyrimidine utilization flavin reductase protein F		rutF	TIGR03615
putative malonic semialdehyde reductase RutE			UniRef100_C4ZQD6
pyrimidine utilization protein D		rutD	TIGR03611
pyrimidine utilization protein C		rutC	TIGR03610
pyrimidine utilization protein B		rutB	TIGR03614
pyrimidine utilization protein A		rutA	TIGR03612
pyrimidine utilization regulatory protein R		rutR	TIGR03613
bifunctional protein putA	1.5.1.12	putA	UniRef100_P09546
putative predicted protein			UniRef100_D6IM82
sodium/proline symporter		putP	TIGR02121
ferrous iron permease efeU		efeU	UniRef100_Q8FJ36
conserved hypothetical protein			UniRef100_Q9K1P6
peroxidase ycdB	1.11.1.-	ycdB	UniRef100_P31545
protein phoH		phoH	UniRef100_P0A9K2
poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD		pgaD	TIGR03940
poly-beta-1,6 N-acetyl-D-glucosamine synthase	2.4.1.-	pgaC	TIGR03937
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	3.5.1.-	pgaB	TIGR03938
poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA		pgaA	TIGR03939
putative diguanylate cyclase YcdT			UniRef100_P75908
integrase core domain protein			PF00665.21
transposase family protein			PF01527.15
putative (Acyl-carrier-protein) S-malonyltransferase			UniRef100_E8Q1F1
photosystem II complex subunit Ycf12 family protein			PF05969.6
NAD binding domain of 6-phosphogluconate dehydrogenase family protein			PF03446.10
putative hydrolase ycdX			UniRef100_C4ZRX5
nitrate reductase delta subunit			PF02613.10
inner membrane protein ycdZ		ycdZ	UniRef100_P75916
curli production assembly/transport component CsgG family protein			PF03783.9
type VIII secretion system (T8SS), CsgF family protein			PF10614.4
curli assembly CsgE family protein			PF10627.4
csgBAC operon transcriptional regulatory protein		csgD	UniRef100_P52106
putative conserved predicted protein			UniRef100_C8U5J6
minor curlin subunit		csgB	UniRef100_P0A1E9
major curlin subunit		csgA	UniRef100_P28307
curli assembly protein CsgC		csgC	UniRef100_P0A1Z9
conserved hypothetical protein			UniRef100_A8AI36
regulator of RNase III activity		ymdB	UniRef100_P0A8D8
phospholipase D family protein			PF00614.17
acyltransferase family protein			PF01757.17
glucans biosynthesis protein G		mdoG	UniRef100_C4ZRY9
glucans biosynthesis glucosyltransferase H	2.4.1.-	mdoH	UniRef100_P62518
conserved hypothetical protein			PF07119.7
msyB family protein			PF13984.1
sugar (and other) transporter family protein			PF00083.19
lipid A biosynthesis lauroyl acyltransferase	2.3.1.-	htrB	UniRef100_P0ACV1
rhodanese-like domain protein			PF00581.15
yceI-like domain protein			PF04264.8
conserved hypothetical protein			UniRef100_P75925
N-methyl-L-tryptophan oxidase	1.5.3.-	solA	UniRef100_C4ZRZ9
bssS family protein			PF13991.1
DNA-damage-inducible protein I		dinI	UniRef100_P0ABR3
dihydroorotase, homodimeric type	3.5.2.3	pyrC	TIGR00856
conserved hypothetical protein			UniRef100_P0AB26
glutaredoxin, GrxB family		grxB	TIGR02182
major Facilitator Superfamily protein			PF07690.11
ribosomal-protein-alanine acetyltransferase	2.3.1.128	rimJ	UniRef100_P0A949
conserved hypothetical protein			UniRef100_C4ZS07
conserved hypothetical protein			UniRef100_P75931
integral membrane protein MviN		mviN	TIGR01695
flgN family protein			PF05130.7
flagellar biosynthesis anti-sigma factor FlgM		flgM	TIGR03824
flagella basal body P-ring formation protein FlgA		flgA	TIGR03170
flagellar basal-body rod protein FlgB		flgB	TIGR01396
flagellar basal-body rod protein FlgC		flgC	TIGR01395
basal-body rod modification protein flgD		flgD	UniRef100_P0A1J0
flagellar hook protein flgE		flgE	UniRef100_P75937
flagellar basal-body rod protein flgF		flgF	UniRef100_P16323
flagellar basal-body rod protein FlgG		flgG	TIGR02488
flagellar L-ring family protein			PF02107.11
flagellar P-ring family protein			PF02119.11
flagellar rod assembly protein/muramidase FlgJ		flgJ	TIGR02541
flagellar hook-associated protein FlgK		flgK	TIGR02492
flagellar hook-associated protein 3		flgL	TIGR02550
ribonuclease E	3.1.26.12	rne	UniRef100_P21513
			
pseudouridine synthase, RluA family protein	5.4.99.-		TIGR00005
septum formation protein Maf		maf	TIGR00172
			
conserved hypothetical protein			PF02620.12
ribosomal protein L32		rpmF	TIGR01031
fatty acid/phospholipid synthesis protein PlsX		plsX	TIGR00182
3-oxoacyl-[acyl-carrier-protein] synthase 3	2.3.1.180	fabH	UniRef100_A7ZKJ4
malonyl CoA-acyl carrier protein transacylase	2.3.1.39	fabD	TIGR00128
3-oxoacyl-[acyl-carrier-protein] reductase	1.1.1.100	fabG	TIGR01830
acyl carrier protein		acpP	TIGR00517
beta-ketoacyl-acyl-carrier-protein synthase II	2.3.1.179	fabF	TIGR03150
aminodeoxychorismate lyase	4.1.3.38	pabC	TIGR03461
yceG-like family protein			PF02618.11
thymidylate kinase	2.7.4.9	tmk	TIGR00041
DNA polymerase III subunit delta'	2.7.7.7	holB	UniRef100_P28631
conserved hypothetical protein			UniRef100_P0AFQ9
PTS system glucose-specific EIICB component	2.7.1.69	ptsG	UniRef100_P69788
fhuE receptor		fhuE	UniRef100_P16869
conserved hypothetical protein			UniRef100_B3IQD9
HIT domain protein			PF01230.18
conserved hypothetical protein			PF07233.7
conserved hypothetical protein			PF13036.1
thiamine kinase	2.7.1.89	thiK	TIGR02721
glycosyl hydrolase family 3 N terminal domain protein			PF00933.16
conserved hypothetical protein			PF05728.7
NADH dehydrogenase	1.6.99.3	ndh	UniRef100_P00393
glycine-zipper containing OmpA-like membrane domain protein			PF13436.1
bacterial regulatory s, tetR family protein			PF00440.18
multiple stress resistance protein BhsA		bhsA	UniRef100_P0AB42
putative L,D-transpeptidase YcfS			UniRef100_P75954
transcription-repair coupling factor	3.6.1.-	mfd	TIGR00580
inner membrane protein YcfT		ycfT	UniRef100_P75955
lipo-releasing system transmembrane protein lolC		lolC	UniRef100_P0ADC5
liporeleasing system, ATP-binding protein	3.6.3.-	lolD	TIGR02211
liporeleasing system, transmembrane protein LolE		lolE	TIGR02213
glucokinase family protein			PF02685.11
sir2 family protein			PF02146.12
inner membrane protein ycfZ		ycfZ	UniRef100_P75961
inner membrane protein ymfA		ymfA	UniRef100_P75962
bacterial extracellular solute-binding family protein			PF13416.1
binding--dependent transport system inner membrane component family protein			PF00528.17
binding--dependent transport system inner membrane component family protein			PF00528.17
polyamine ABC transporter, ATP-binding family protein	3.6.3.31		TIGR01187
putative predicted protein			UniRef100_D6IMQ3
peptidase T	3.4.11.-	pepT	TIGR01882
cupin superfamily protein			PF08007.7
sensor protein PhoQ	2.7.13.3	phoQ	UniRef100_P23837
transcriptional regulatory protein phoP		phoP	UniRef100_P23836
adenylosuccinate lyase	4.3.2.2	purB	TIGR00928
high frequency lysogenization protein hflD		hflD	UniRef100_A7ZKS2
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	2.1.1.61	trmU	TIGR00420
phosphatase nudJ	3.6.1.-	nudJ	UniRef100_A7ZKS4
pseudouridine synthase family protein	5.4.99.-		TIGR00093
isocitrate dehydrogenase, NADP-dependent	1.1.1.42	icd	TIGR00183
			
e14 prophage; predicted inner membrane domain protein		ymfE	UniRef100_P75968
peptidase U49 family protein			PF10463.4
phage integrase family protein			PF00589.17
			
			
			
peptidase S24-like family protein			PF00717.18
conserved hypothetical protein			UniRef100_P75975
putative predicted DNA-binding transcriptional regulator			UniRef100_P75976
			
			
phage Terminase family protein			PF03354.10
putative membrane protein			TMHMM
phage portal family protein			PF04860.7
baseplate J-like family protein			PF04865.9
conserved hypothetical protein			PF10076.4
conserved hypothetical protein			UniRef100_P45581
caudovirales tail fibre assembly family protein			PF02413.12
caudovirales tail fibre assembly family protein			PF02413.12
phage Tail Collar domain protein			PF07484.7
resolvase, N terminal domain protein			PF00239.16
HNH endonuclease family protein			PF01844.18
isocitrate/isopropylmalate dehydrogenase family protein			PF00180.15
conserved hypothetical protein			UniRef100_P76156
HTH-type transcriptional repressor YcgE		ycgE	UniRef100_P75989
blue light- and temperature-regulated antirepressor YcgF		ycgF	UniRef100_P75990
			
putative two-component-system connector protein AriR			UniRef100_A7ZKT2
putative protein involved in biofilm formation			UniRef100_P75994
EAL domain protein			PF00563.15
putative membrane protein			TMHMM
outer membrane autotransporter barrel domain protein			TIGR01414
outer membrane autotransporter barrel domain protein			TIGR01414
conserved hypothetical protein			UniRef100_P0AB47
glycine zipper family protein			PF13488.1
outer membrane autotransporter barrel domain protein			TIGR01414
cell division topological specificity factor MinE		minE	TIGR01215
septum site-determining protein MinD		minD	TIGR01968
septum site-determining protein MinC		minC	TIGR01222
fels-1 Prophage Protein-like family protein			PF05666.6
conserved hypothetical protein			UniRef100_P76002
conserved hypothetical protein			UniRef100_B7MK76
fumarylacetoacetate (FAA) hydrolase family protein			PF01557.13
flagellin N-methylase family protein			PF03692.10
hemolysin E, chromosomal		hlyE	UniRef100_P77335
protein umuD	3.4.21.-	umuD	UniRef100_P22493
impB/mucB/samB family protein			PF00817.15
disulfide bond formation DsbB family protein			PF02600.11
na+/H+ antiporter NhaB		nhaB	TIGR00774
fatty acid metabolism transcriptional regulator FadR		fadR	TIGR02812
spoVR like family protein			PF04293.8
flavin containing amine oxidoreductase family protein			PF01593.19
alanine racemase	5.1.1.1	alr	TIGR00492
transporter associated domain protein			PF03471.12
murein tetrapeptide carboxypeptidase	3.4.17.13	ldcA	UniRef100_P76008
transglycosylase SLT domain protein			PF01464.15
flagellar brake protein YcgR		ycgR	UniRef100_P76010
transglycosylase associated family protein			PF04226.8
conserved hypothetical protein			UniRef100_P76012
periplasmic trehalase	3.2.1.28	treA	UniRef100_C4ZTN8
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM	2.7.1.-	dhaM	UniRef100_P37349
dihydroxyacetone kinase, L subunit	2.7.-.-	dhaL	TIGR02365
dihydroxyacetone kinase, DhaK subunit	2.7.1.-	dhaK	TIGR02363
bacterial regulatory , Fis family protein			PF02954.14
outer membrane autotransporter barrel domain protein			TIGR01414
conserved hypothetical protein			UniRef100_E6B8G5
GTP-dependent nucleic acid-binding protein engD		engD	UniRef100_P0ABU3
peptidyl-tRNA hydrolase	3.1.1.29	pth	TIGR00447
conserved hypothetical protein			PF10762.4
putative sulfate transporter ychM			UniRef100_P0AFR3
ribose-phosphate pyrophosphokinase	2.7.6.1	prs	UniRef100_P0A719
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	2.7.1.148	ispE	TIGR00154
outer membrane lipoprotein LolB		lolB	TIGR00548
glutamyl-tRNA reductase	1.2.1.70	hemA	TIGR01035
peptide chain release factor 1		prfA	TIGR00019
protein-(glutamine-N5) methyltransferase, release factor-specific	2.1.1.-	prmC	TIGR03534
protein sirB2		sirB2	UniRef100_Q46755
tetratricopeptide repeat family protein			PF13371.1
3-deoxy-8-phosphooctulonate synthase	2.5.1.55	kdsA	TIGR01362
calcium/proton antiporter		chaA	UniRef100_P31801
cation transport regulator ChaB		chaB	UniRef100_P0AE65
chaC-like family protein			PF04752.7
protein ychN		ychN	UniRef100_P0AB53
conserved hypothetical protein			PF11924.3
response regulator		narL	UniRef100_P0AF30
nitrate/nitrite sensor protein narX	2.7.13.3	narX	UniRef100_P0AFA3
putative predicted protein			UniRef100_D6J9J7
nitrite extrusion protein 1		narK	UniRef100_P10903
nitrate reductase, alpha subunit	1.7.99.4		TIGR01580
nitrate reductase, beta subunit	1.7.99.4	narH	TIGR01660
nitrate reductase molybdenum cofactor assembly chaperone		narJ	TIGR00684
respiratory nitrate reductase, gamma subunit	1.7.99.4	narI	TIGR00351
formyltetrahydrofolate deformylase	3.5.1.10	purU	TIGR00655
conserved hypothetical protein			UniRef100_B7LHH6
patatin-like phospholipase family protein			PF01734.17
protein hnr		hnr	UniRef100_P0AEV2
UTP-glucose-1-phosphate uridylyltransferase	2.7.7.9	galU	TIGR01099
DNA-binding protein H-NS		hns	UniRef100_P0ACG0
thymidine kinase family protein			PF00265.13
putative acetaldehyde dehydrogenase 2			UniRef100_P30192
insertion element 4 transposase N-terminal family protein			PF13006.2
aldehyde-alcohol dehydrogenase	1.2.1.10	adhE	UniRef100_P0A9Q8
marC integral membrane family protein			PF01914.12
putative predicted protein			UniRef100_D6J9L4
			
periplasmic oligopeptide-binding protein		oppA	UniRef100_P23843
oligopeptide transport system permease protein oppB		oppB	UniRef100_P08005
oligopeptide transport system permease protein oppC		oppC	UniRef100_P0AFH7
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
conserved hypothetical protein			UniRef100_A7ZL19
cardiolipin synthase	2.7.8.-	cls	TIGR04265
voltage-gated potassium channel Kch		kch	UniRef100_P31069
protein yciI		yciI	UniRef100_P0AB56
protein tonB		tonB	UniRef100_P02929
conserved hypothetical protein			UniRef100_P44886
intracellular septation protein A		ispZ	TIGR00997
conserved hypothetical protein			UniRef100_C4ZTU8
outer membrane protein W		ompW	UniRef100_P0A915
protein yciE		yciE	UniRef100_P21363
protein yciF		yciF	UniRef100_P21362
conserved hypothetical protein			UniRef100_P21361
tryptophan synthase, alpha subunit	4.2.1.20	trpA	TIGR00262
tryptophan synthase, beta subunit	4.2.1.20	trpB	TIGR00263
tryptophan biosynthesis protein trpCF	5.3.1.24	trpC	UniRef100_P00909
anthranilate synthase component II	2.4.2.18	trpD	UniRef100_P00904
anthranilate synthase component I	4.1.3.27	trpE	TIGR00565
PHP domain protein			PF02811.14
conserved hypothetical protein			UniRef100_P0AFR5
conserved hypothetical protein			PF09972.4
pseudouridine synthase family protein	5.4.99.-		TIGR00093
cob(I)yrinic acid a,c-diamide adenosyltransferase	2.5.1.17	cobO	TIGR00708
conserved hypothetical protein			UniRef100_P31808
putative protease sohB			UniRef100_P0AG14
protein yciN		yciN	UniRef100_P0AB63
DNA topoisomerase I	5.99.1.2	topA	TIGR01051
HTH-type transcriptional regulator CysB		cysB	UniRef100_P06614
conserved hypothetical protein			UniRef100_P58094
aconitate hydratase 1	4.2.1.3	acnA	TIGR01341
GTP cyclohydrolase-2	3.5.4.25	ribA	UniRef100_A7ZL97
phosphatidylglycerophosphatase B	3.1.3.27	pgpB	UniRef100_P0A925
inner membrane protein yciS		yciS	UniRef100_P0ACV4
TPR repeat family protein			PF13414.1
orotidine 5'-phosphate decarboxylase	4.1.1.23	pyrF	UniRef100_C4ZTX6
conserved hypothetical protein			UniRef100_P08245
glycine zipper 2TM domain protein			PF05433.10
deoR C terminal sensor domain protein			PF00455.17
putative uPF0509 protein yciZ			UniRef100_B7UR93
cyclic di-GMP phosphodiesterase Gmr	3.1.4.52	gmr	UniRef100_P77334
exoribonuclease II	3.1.13.1	rnb	TIGR02062
putative amidase/amidotransferase			UniRef100_D6IPG0
enoyl-[acyl-carrier-protein] reductase [NADH] FabI	1.3.1.9	fabI	UniRef100_P0AEK5
conserved hypothetical protein			UniRef100_Q9ZIE8
peptide transport system ATP-binding protein SapF		sapF	UniRef100_P0AAH9
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
peptide transport system permease protein sapC		sapC	UniRef100_P0AGH6
peptide transport system permease protein sapB		sapB	UniRef100_P0AGH4
bacterial extracellular solute-binding s, 5 Middle family protein			PF00496.17
conserved hypothetical protein			PF10820.3
putrescine importer PuuP		puuP	UniRef100_P76037
gamma-glutamylputrescine synthetase PuuA	6.3.1.11	puuA	UniRef100_P78061
glutamine amidotransferase class-I family protein			PF00117.23
HTH-type transcriptional regulator PuuR		puuR	UniRef100_P0A9U6
aldehyde dehydrogenase PuuC	1.2.1.5	puuC	UniRef100_P23883
gamma-glutamylputrescine oxidoreductase	1.4.3.-	puuB	UniRef100_P37906
4-aminobutyrate transaminase	2.6.1.19	gabT	TIGR00700
psp operon transcriptional activator		pspF	TIGR02974
phage shock protein A		pspA	TIGR02977
phage shock protein B		pspB	TIGR02976
phage shock protein C		pspC	TIGR02978
phage shock PspD family protein			PF09584.5
thiosulfate sulfurtransferase PspE	2.8.1.1	pspE	UniRef100_P23857
alpha amylase, catalytic domain protein			PF00128.19
bacterial extracellular solute-binding family protein			PF13416.1
binding--dependent transport system inner membrane component family protein			PF00528.17
binding--dependent transport system inner membrane component family protein			PF00528.17
zinc-binding dehydrogenase family protein			PF00107.21
xylose isomerase-like TIM barrel family protein			PF01261.19
conserved hypothetical protein			UniRef100_P77503
glycosyl hydrolase family 65 central catalytic domain protein			PF03632.10
beta-phosphoglucomutase	5.4.2.6	pgmB	TIGR01990
ABC transporter family protein			PF00005.22
outer membrane protein G		ompG	UniRef100_P76045
helix-turn-helix family protein			PF01381.17
conserved hypothetical protein			UniRef100_P76046
conserved hypothetical protein			UniRef100_B7MLZ8
transcriptional regulatory protein tyrR		tyrR	UniRef100_P07604
thiol peroxidase	1.11.1.-	tpx	UniRef100_P0A864
zinc carboxypeptidase family protein			PF00246.19
L-Ala-D/L-Glu epimerase	5.1.1.-	ycjG	UniRef100_P51981
conserved hypothetical protein			UniRef100_Q2EER5
conserved hypothetical protein			UniRef100_P76049
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
periplasmic murein peptide-binding protein		mppA	UniRef100_P77348
mechanosensitive ion channel family protein			PF00924.13
transposase DDE domain protein			PF01609.16
conserved hypothetical protein			PF10749.4
universal stress protein E		uspE	UniRef100_P0AAC2
fumarate and nitrate reduction regulatory protein		fnr	UniRef100_P0A9E7
methylated-DNA--protein-cysteine methyltransferase	2.1.1.63	ogt	UniRef100_P0AFH0
aminobenzoyl-glutamate transport protein		abgT	UniRef100_P46133
amidohydrolase family protein			TIGR01891
indole-3-acetyl-aspartic acid hydrolase	3.5.1.-	iaaH	UniRef100_O50173
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
			
smr domain protein			PF01713.16
putative diguanylate cyclase YdaM			UniRef100_P77302
zinc transport protein ZntB		zntB	UniRef100_A7ZLH2
			
ATP-independent RNA helicase dbpA	3.6.4.13	dbpA	UniRef100_P21693
tRNA 2-thiocytidine biosynthesis protein TtcA		ttcA	UniRef100_C4ZV92
putative lambdoid prophage Rac integrase			UniRef100_P76056
putative excisionase			UniRef100_A6T888
			
protein recT		recT	UniRef100_P33228
exodeoxyribonuclease 8	3.1.11.-	recE	UniRef100_P15032
putative rac prophage; predicted protein			UniRef100_A1AAW0
rtr1/RPAP2 family protein			PF04181.8
protein kil		kil	UniRef100_P38393
conserved hypothetical protein			PF07151.7
superinfection exclusion B family protein			PF14163.1
			
			
conserved hypothetical protein			PF06254.6
conserved hypothetical protein			PF07120.6
DNA replication protein dnaC		dnaC	UniRef100_P0AEF2
conserved hypothetical protein			PF07789.7
bacteriophage lysis family protein			PF03245.8
trk system potassium uptake protein trkG		trkG	UniRef100_P23849
parB-like nuclease domain protein			PF02195.13
putative rac prophage; predicted protein			UniRef100_P76069
prophage tail length tape measure family protein			PF06791.8
transposase DDE domain protein			PF01609.16
enterobacterial Ail/Lom family protein			PF06316.6
putative predicted protein			UniRef100_D6IQ11
conserved hypothetical protein			UniRef100_D7XG81
conserved domain protein			UniRef100_D7XG81
phage tail fibre repeat family protein			PF03406.8
tail fiber assembly protein		tfa	UniRef100_P03740
putative DNA-invertase from lambdoid prophage Rac			UniRef100_P0ADI1
putative rac prophage; predicted DNA-binding transcriptional regulator			UniRef100_P76073
conserved hypothetical protein			UniRef100_D8EFM8
conserved hypothetical protein			UniRef100_A6T8F5
outer membrane protein N		ompN	UniRef100_P77747
ferredoxin (flavodoxin) oxidoreductase	1.2.7.1	nifJ	TIGR02176
heat shock protein hslJ		hslJ	UniRef100_P52644
conserved hypothetical protein			PF03891.10
D-lactate dehydrogenase	1.1.1.28	ldhA	UniRef100_P52643
dicarboxylate transport family protein			PF11739.3
ynbE-like lipofamily protein			PF13617.1
conserved hypothetical protein			PF07027.7
transcriptional activator feaR		feaR	UniRef100_Q47129
phenylacetaldehyde dehydrogenase	1.2.1.39	feaB	UniRef100_P80668
primary amine oxidase	1.4.3.21	tynA	UniRef100_P46883
phenylacetic acid degradation protein paaN		paaN	TIGR02278
phenylacetic acid degradation protein paaA		paaA	UniRef100_P76077
phenylacetic acid degradation B family protein			PF06243.6
phenylacetic acid degradation protein paaC		paaC	UniRef100_P76079
phenylacetate-CoA oxygenase, PaaJ subunit		paaJ	TIGR02159
2Fe-2S iron-sulfur cluster binding domain protein			PF00111.22
putative enoyl-CoA hydratase, mitochondrial			UniRef100_P34559
phenylacetate degradation putative enoyl-CoA hydratase PaaB	4.2.1.17	paaB	TIGR02280
3-hydroxyacyl-CoA dehydrogenase PaaC	1.1.1.-	paaC	TIGR02279
phenylacetic acid degradation protein PaaD		paaD	TIGR02286
3-oxoadipyl-CoA thiolase	2.3.1.174	pcaF	TIGR02430
phenylacetate-CoA ligase	6.2.1.30	paaF	TIGR02155
phenylacetic acid degradation operon negative regulatory protein PaaX		paaX	TIGR02277
phenylacetic acid degradation protein PaaY		paaY	TIGR02287
integrase core domain protein			PF00665.21
autotransporter (AT) family porin		ydbA	UniRef100_C9QWV5
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
autotransporter beta-domain protein			PF03797.14
putative oxidoreductase YdbC			UniRef100_P25906
conserved hypothetical protein			PF10971.3
inner membrane protein ynbA		ynbA	UniRef100_P76090
cytidylyltransferase family protein			PF01148.15
conserved hypothetical protein			UniRef100_P76092
conserved hypothetical protein			UniRef100_P76093
NADPH-dependent FMN reductase family protein			PF03358.10
ATP-dependent helicase HrpA	3.6.4.-	hrpA	TIGR01967
protein ydcF		ydcF	UniRef100_P34209
lactaldehyde dehydrogenase	1.2.1.21	aldA	UniRef100_P25553
glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein			PF02800.15
glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein			PF02800.15
conserved hypothetical protein			UniRef100_P76345
conserved hypothetical protein			UniRef100_P0ACW4
			
			
methyl-accepting chemotaxis protein III		trg	UniRef100_P05704
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			PF07063.8
glucans biosynthesis protein D		mdoD	UniRef100_C4ZVG4
conserved hypothetical protein			PF04325.8
putative transferase			UniRef100_B5BJ98
ribosomal-protein-serine acetyltransferase	2.3.1.-	rimL	UniRef100_P13857
tellurite resistance protein tehA		tehA	UniRef100_P25396
tellurite resistance protein TehB		tehB	TIGR00477
conserved hypothetical protein			PF11769.3
transposase IS200 like family protein			PF01797.11
			
transposase, IS605 OrfB family			TIGR01766
inner membrane protein ydcO		ydcO	UniRef100_P76103
helix-turn-helix family protein			PF01381.17
conserved hypothetical protein			UniRef100_P76104
conserved hypothetical protein			PF10829.3
			
antitoxin HicB		hicB	UniRef100_P67698
conserved hypothetical protein			UniRef100_P77730
bacterial extracellular solute-binding family protein			PF13416.1
ABC transporter family protein			PF00005.22
inner membrane ABC transporter permease protein ydcU		ydcU	UniRef100_P77156
inner membrane ABC transporter permease protein ydcV		ydcV	UniRef100_P0AFR9
1-pyrroline dehydrogenase	1.2.1.19	ydcW	TIGR03374
conserved hypothetical protein			PF10753.4
conserved hypothetical protein			PF10735.4
inner membrane protein ydcZ		ydcZ	UniRef100_P76111
acetyltransferase family protein			PF00583.19
zinc-binding dehydrogenase family protein			PF00107.21
HTH-type transcriptional regulator mcbR		mcbR	UniRef100_P76114
tonB-dependent siderophore receptor family protein			TIGR01783
conserved hypothetical protein			UniRef100_P76116
amino acid permease family protein			PF00324.16
putative glutathione S-transferase			UniRef100_D4XDJ7
conserved hypothetical protein			UniRef100_P76118
RHS repeat-associated core domain protein			TIGR03696
putative dCTP deaminase			UniRef100_P31991
H repeat-associated protein yhhI		yhhI	UniRef100_P28912
H repeat-associated protein ydcC		ydcC	UniRef100_P28917
flavin reductase like domain protein			PF01613.13
tautomerase pptA	5.3.2.-	pptA	UniRef100_C4ZWN2
N-hydroxyarylamine O-acetyltransferase	2.3.1.118	nhoA	UniRef100_Q00267
conserved hypothetical protein			UniRef100_P37757
respiratory nitrate reductase, gamma subunit	1.7.99.4	narI	TIGR00351
nitrate reductase molybdenum cofactor assembly chaperone		narJ	TIGR00684
nitrate reductase, beta subunit	1.7.99.4	narH	TIGR01660
nitrate reductase, alpha subunit	1.7.99.4		TIGR01580
nitrite extrusion protein 2		narU	UniRef100_P37758
			
leucine Rich Repeat family protein			PF00560.28
gram-negative porin family protein			PF00267.16
inner membrane protein yddG		yddG	UniRef100_P46136
molybdopterin oxidoreductase family protein			PF00384.17
formate dehydrogenase, alpha subunit	1.2.1.2		TIGR01553
formate dehydrogenase, beta subunit	1.2.1.2	fdxH	TIGR01582
formate dehydrogenase, gamma subunit	1.2.1.2		TIGR01583
			
addiction module antidote protein, HigA family		higA	TIGR02607
alcohol dehydrogenase, propanol-preferring	1.1.1.1	adhP	UniRef100_P39451
NAD-dependent malic enzyme	1.1.1.38	maeA	UniRef100_C4ZWP8
biofilm-dependent modulation family protein			PF10684.4
peroxiredoxin osmC	1.11.1.15	osmC	UniRef100_P0C0L2
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
putative D,D-dipeptide transport system permease protein ddpC			UniRef100_P77463
putative D,D-dipeptide transport system permease protein ddpB			UniRef100_P77308
bacterial extracellular solute-binding s, 5 Middle family protein			PF00496.17
D-alanyl-D-alanine dipeptidase	3.4.13.22	ddpX	UniRef100_P77790
oxygen sensor protein DosP	3.1.4.52	dosP	UniRef100_P76129
diguanylate cyclase domain protein			TIGR00254
conserved hypothetical protein			PF02638.10
gamma-aminobutyrate antiporter		gadC	TIGR00910
glutamate decarboxylase	4.1.1.15		TIGR01788
peptidase M16 inactive domain protein			PF05193.16
tonB-dependent Receptor Plug domain protein			PF07715.10
inner membrane ABC transporter ATP-binding protein YddA		yddA	UniRef100_P31826
anaerobic sulfatase maturase	1.1.99.-		TIGR03942
type I phosphodiesterase / nucleotide pyrophosphatase family protein			PF01663.17
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
two-component-system connector protein SafA		safA	UniRef100_B1IRV8
protein ydeP		ydeP	UniRef100_P77561
protein fimH		fimH	UniRef100_P08191
protein fimG		fimG	UniRef100_P08190
protein fimF		fimF	UniRef100_P08189
type VII secretion system (T7SS), usher family protein			PF00577.15
serine/threonine-protein kinase HipA	2.7.11.1	hipA	UniRef100_P23874
antitoxin HipB		hipB	UniRef100_P23873
outer membrane autotransporter barrel domain protein			TIGR01414
putative predicted lipoprotein			UniRef100_P32051
autoinducer 2 kinase LsrK	2.7.1.-	lsrK	UniRef100_B1XE99
transcriptional regulator lsrR		lsrR	UniRef100_B1XEA0
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
branched-chain amino acid transport system / permease component family protein			PF02653.11
branched-chain amino acid transport system / permease component family protein			PF02653.11
autoinducer 2-binding protein lsrB		lsrB	UniRef100_B1XEA4
conserved hypothetical protein			UniRef100_B1XEA5
autoinducer 2-degrading protein lsrG		lsrG	UniRef100_A7FMK2
trans-aconitate 2-methyltransferase	2.1.1.144	tam	UniRef100_C4ZWT6
bestrophin, RFP-TM, chloride channel family protein			PF01062.16
mannitol dehydrogenase Rossmann domain protein			PF01232.18
diguanylate cyclase domain protein			TIGR00254
conserved hypothetical protein			PF13811.1
glutaminase A	3.5.1.2	glsA	TIGR03814
succinate semialdehyde dehydrogenase [NAD(P)+] Sad	1.2.1.16	sad	UniRef100_P76149
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			UniRef100_P76150
sugar efflux transporter		sotB	UniRef100_P31122
marC integral membrane family protein			PF01914.12
multiple antibiotic resistance protein marR		marR	UniRef100_P27245
multiple antibiotic resistance protein marA		marA	UniRef100_P0ACH6
marB family protein			PF13999.1
putative amino-acid metabolite efflux pump			UniRef100_P31125
major Facilitator Superfamily protein			PF07690.11
diguanylate cyclase YdeH	2.7.7.65	ydeH	UniRef100_P31129
bacterial OB fold family protein			PF04076.8
competence/damage-inducible CinA C-terminal domain protein			TIGR00199
peptidyl-dipeptidase dcp	3.4.15.5	dcp	UniRef100_P24171
NADP-dependent 3-hydroxy acid dehydrogenase YdfG	1.1.1.298	ydfG	UniRef100_P39831
conserved hypothetical protein			UniRef100_P0ACM3
putative selenoprotein ydfZ			UniRef100_P64465
mannitol dehydrogenase Rossmann domain protein			PF01232.18
H+ symporter family protein			TIGR00883
putative dNA-binding transcriptional regulator			UniRef100_P76154
putative DNA-invertase from lambdoid prophage Rac			UniRef100_P0ADI1
tail fiber assembly protein		tfa	UniRef100_P03740
phage tail fibre repeat family protein			PF03335.8
terminase small subunit		Nu1	UniRef100_P03707
conserved hypothetical protein			PF13132.1
			
gnsA/GnsB family protein			PF08178.6
			
cold shock-like protein CspG		cspG	UniRef100_P0A980
conserved hypothetical protein			PF10721.4
phage lysozyme family protein			PF00959.14
conserved hypothetical protein			UniRef100_P76160
lysis S family protein			PF04971.7
			
cold shock protein CspA		cspA	UniRef100_P0A9Y1
RNA chaperone, negative regulator of cspA transcription		cspE	UniRef100_D2TMR8
dnaJ central domain protein			PF00684.14
conserved hypothetical protein			PF06147.6
conserved hypothetical protein			UniRef100_P07010
			
			
antitoxin RelB		relB	UniRef100_P0C079
flxA-like family protein			PF14282.1
			
conserved hypothetical protein			PF06254.6
putative division inhibition gene repressor protein DicB			UniRef100_P06965
			
conserved hypothetical protein			PF07151.7
conserved hypothetical protein			UniRef100_P21418
			
conserved hypothetical protein			UniRef100_A1ACG0
dicB family protein			PF05358.6
conserved hypothetical protein			PF07358.6
exonuclease family protein			UniRef100_E2WP61
integrase core domain protein			PF00665.21
phage integrase family protein			PF00589.17
zinc-binding dehydrogenase family protein			PF00107.21
starvation-sensing protein rspA		rspA	UniRef100_P38104
conserved hypothetical protein			PF02694.10
conserved hypothetical protein			UniRef100_B7LZX5
spermidine N(1)-acetyltransferase	2.3.1.57	speG	UniRef100_P0A952
conserved hypothetical protein			PF06788.8
conserved hypothetical protein			UniRef100_P76172
putative dimethyl sulfoxide reductase chain ynfE			UniRef100_P77374
anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein			TIGR02166
dimethylsulfoxide reductase, chain B		dmsB	TIGR02951
DMSO reductase anchor subunit family protein			PF04976.7
twin-arginine leader-binding protein dmsD		dmsD	UniRef100_P69854
dethiobiotin synthase	6.3.3.3	bioD	TIGR00347
voltage-gated ClC-type chloride channel ClcB		clcB	UniRef100_C4ZY54
protein mlc		mlc	UniRef100_P50456
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
inner membrane transport protein ynfM		ynfM	UniRef100_P43531
acid shock repeat family protein			PF06392.6
trypsin family protein			PF00089.21
small Multidrug Resistance family protein			PF00893.14
spermidine export protein mdtJ		mdtJ	UniRef100_A7ZM59
conserved hypothetical protein			PF01594.11
NAD(P) transhydrogenase subunit beta	1.6.1.2	pntB	UniRef100_P0AB69
NAD(P)(+) transhydrogenase (AB-specific), alpha subunit	1.6.1.2	pntA	TIGR00561
protein ydgH		ydgH	UniRef100_P76177
putative arginine/ornithine antiporter			UniRef100_P0AAE6
inner membrane protein ydgC		ydgC	UniRef100_P0ACX1
short chain dehydrogenase family protein			PF00106.20
response regulator			PF00072.19
sensor protein rstB	2.7.13.3	rstB	UniRef100_P18392
fumarate hydratase, class II	4.2.1.2	fumC	TIGR00979
DNA replication terminus site-binding protein		tus	TIGR02648
fumarate hydratase class I, aerobic	4.2.1.2	fumA	UniRef100_P0AC34
mannose-6-phosphate isomerase, class I	5.3.1.8	manA	TIGR00218
protein ydgA		ydgA	UniRef100_P77804
membrane-associated protein uidC		uidC	UniRef100_Q47706
conserved hypothetical protein			UniRef100_P0CE44
beta-glucuronidase	3.2.1.31	uidA	UniRef100_P05804
bacterial regulatory s, tetR family protein			PF00440.18
7-alpha-hydroxysteroid dehydrogenase	1.1.1.159	hdhA	UniRef100_P0AET9
periplasmic binding s and sugar binding domain of LacI family protein			PF00532.16
PTS system, maltose and glucose-specific subfamily, IIC component domain protein			TIGR00852
protein MalY	4.4.1.8	malY	UniRef100_P23256
adenosine deaminase	3.5.4.4	add	TIGR01430
conserved hypothetical protein			UniRef100_P77376
modulating protein ymoA		ymoA	UniRef100_P0A3X1
inner membrane protein ydgK		ydgK	UniRef100_P76180
electron transport complex, RnfABCDGE type, A subunit			TIGR01943
electron transport complex, RnfABCDGE type, B subunit			TIGR01944
electron transport complex, RnfABCDGE type, C subunit			TIGR01945
electron transport complex, RnfABCDGE type, D subunit			TIGR01946
electron transport complex, RnfABCDGE type, G subunit			TIGR01947
electron transport complex, RnfABCDGE type, E subunit			TIGR01948
endonuclease III	4.2.99.18	nth	TIGR01083
			
H+ symporter) family protein			TIGR00924
glutathione S-transferase	2.5.1.18	gst	UniRef100_P0A9D3
pyridoxal kinase	2.7.1.35		TIGR00687
tyrosine--tRNA ligase	6.1.1.1	tyrS	TIGR00234
pyridoxamine 5'-phosphate oxidase	1.4.3.5	pdxH	TIGR00558
membrane-bound lysozyme inhibitor of C-type lysozyme		mliC	UniRef100_P28224
anhydro-N-acetylmuramic acid kinase	2.7.1.n1	anmK	UniRef100_C4ZYA3
outer membrane lipoprotein slyB		slyB	UniRef100_P0A1X1
transcriptional regulator slyA		slyA	UniRef100_P40676
conserved hypothetical protein			PF07869.7
efflux transporter, RND family, MFP subunit			TIGR01730
fusaric acid resistance family protein			PF04632.7
superoxide dismutase [Cu-Zn]	1.15.1.1	sodC	UniRef100_P0AGD2
oxidoreductase YdhF	1.-.-.-	ydhF	UniRef100_P76187
			
HTH-type transcriptional repressor nemR		nemR	UniRef100_P67431
N-ethylmaleimide reductase	1.-.-.-	nemA	UniRef100_P77258
lactoylglutathione lyase	4.4.1.5	gloA	TIGR00068
ribonuclease T	3.1.13.-	rnt	TIGR01298
helicase conserved C-terminal domain protein			PF00271.26
monothiol glutaredoxin, Grx4 family		grxD	TIGR00365
putative hypothe			UniRef100_E2WPM8
conserved hypothetical protein			PF06672.6
superoxide dismutase [Fe]	1.15.1.1	sodB	UniRef100_P0AGD5
inner membrane transport protein ydhP		ydhP	UniRef100_P77389
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
periplasmic binding s and sugar binding domain of LacI family protein			PF00532.16
inner membrane transport protein ydhC		ydhC	UniRef100_P37597
cyclopropane-fatty-acyl-phospholipid synthase	2.1.1.79	cfa	UniRef100_P0A9H8
riboflavin synthase, alpha subunit	2.5.1.9	ribE	TIGR00187
multidrug resistance protein mdtK		mdtK	UniRef100_B7US04
pertactin family protein			PF03212.9
putative monooxygenase ydhR			UniRef100_P0ACX3
conserved hypothetical protein			UniRef100_P77148
conserved hypothetical protein			UniRef100_P77147
prokaryotic cytochrome b561 family protein			PF01292.15
4Fe-4S binding domain protein			PF00037.22
putative predicted oxidoreductase			UniRef100_P77564
aldehyde ferredoxin oxidoreductase, domains 2 & 3 family protein			PF01314.13
conserved hypothetical protein			UniRef100_P0AAL7
conserved hypothetical protein			PF10965.3
pyruvate kinase	2.7.1.40	pyk	TIGR01064
major outer membrane lipoprotein Lpp		lpp	UniRef100_P69778
putative L,D-transpeptidase YnhG			UniRef100_P76193
cysteine desulfuration protein sufE		sufE	UniRef100_B7L5N1
cysteine desulfurase	4.4.1.16	sufS	UniRef100_C4ZYE2
feS assembly protein SufD		sufD	TIGR01981
feS assembly ATPase SufC		sufC	TIGR01978
feS assembly protein SufB		sufB	TIGR01980
feS assembly scaffold SufA		sufA	TIGR01997
conserved hypothetical protein			UniRef100_B7NTV1
esterase YdiI	3.1.-.-	ydiI	UniRef100_P77781
4Fe-4S dicluster domain protein			PF13183.1
conserved hypothetical protein			UniRef100_P0AFS7
conserved hypothetical protein			PF08965.5
inner membrane transport protein ydiM		ydiM	UniRef100_P76197
inner membrane transport protein ydiN		ydiN	UniRef100_P76198
shikimate / quinate 5-dehydrogenase family protein			PF01488.15
3-dehydroquinate dehydratase	4.2.1.10	aroD	UniRef100_C4ZYF5
conserved hypothetical protein			UniRef100_P37766
crotonobetainyl-CoA dehydrogenase	1.3.99.-	caiA	UniRef100_A7ZHD0
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
conserved hypothetical protein			UniRef100_E9W014
electron transfer flavodomain protein			PF01012.16
electron transfer flavodomain protein			PF01012.16
FAD binding domain protein			PF01494.14
putative ferredoxin			UniRef100_P77714
short-chain-fatty-acid--CoA ligase	6.2.1.-	fadK	UniRef100_P38135
phosphoenolpyruvate synthase	2.7.9.2	ppsA	TIGR01418
putative phosphotransferase ydiA			UniRef100_A7ZMH0
3-deoxy-7-phosphoheptulonate synthase	2.5.1.54		TIGR00034
hemin uptake hemP family protein			PF10636.4
conserved hypothetical protein			UniRef100_C4ZYG8
cyclic di-GMP regulator CdgR		cdgR	UniRef100_Q5PH83
nlpC/P60 family protein			PF00877.14
vitamin B12 import ATP-binding protein BtuD	3.6.3.33	btuD	UniRef100_C4ZYH1
glutathione peroxidase family protein			PF00255.14
vitamin B12 import system permease protein BtuC		btuC	UniRef100_B7MAS2
integration host factor, alpha subunit		ihfA	TIGR00987
phenylalanine--tRNA ligase, beta subunit	6.1.1.20	pheT	TIGR00472
phenylalanine--tRNA ligase, alpha subunit	6.1.1.20	pheS	TIGR00468
ribosomal protein L20		rplT	TIGR01032
ribosomal protein L35		rpmI	TIGR00001
			
translation initiation factor IF-3		infC	TIGR00168
threonine--tRNA ligase	6.1.1.3	thrS	TIGR00418
conserved hypothetical protein			UniRef100_E9VPE6
shET2 enterotoxin, N-terminal region family protein			PF07906.8
conserved hypothetical protein			PF04338.7
6-phosphofructokinase isozyme 2	2.7.1.11	pfkB	UniRef100_P06999
conserved hypothetical protein			PF11080.3
phosphotransferase enzyme family protein			PF01636.18
yniB-like family protein			PF14002.1
phosphatase YniC	3.1.3.-	yniC	UniRef100_P77247
inner membrane protein ydjM		ydjM	UniRef100_P64481
sodium:dicarboxylate symporter family protein			PF00375.13
conserved hypothetical protein			UniRef100_P76210
cell division activator CedA		cedA	UniRef100_A7ZMJ8
catalase HPII	1.11.1.6	katE	UniRef100_P21179
			
ydjC-like family protein			PF04794.7
6-phospho-beta-glucosidase	3.2.1.86	chbF	UniRef100_P17411
HTH-type transcriptional regulator ChbR		chbR	UniRef100_P17410
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component	2.7.1.-	chbA	UniRef100_P69793
PTS system, cellobiose-specific IIC component	2.7.1.69	celB	TIGR00359
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component	2.7.1.69	chbB	UniRef100_P69830
smpA / OmlA family protein			PF04355.8
NH(3)-dependent NAD(+) synthetase	6.3.1.5	nadE	UniRef100_C4ZZ96
protein ves		ves	UniRef100_C4ZZ98
excinuclease cho	3.1.25.-	cho	UniRef100_P76213
spheroplast protein Y		spy	UniRef100_P77754
succinylglutamate desuccinylase	3.5.1.96	astE	TIGR03242
succinylarginine dihydrolase	3.5.3.23	astB	TIGR03241
succinylglutamic semialdehyde dehydrogenase	1.2.1.71	astD	TIGR03240
arginine N-succinyltransferase	2.3.1.109	astA	TIGR03244
succinylornithine transaminase family protein	2.6.1.81	astC	TIGR03246
conserved hypothetical protein			UniRef100_B6IBG9
exodeoxyribonuclease III	3.1.11.2	xth	TIGR00195
conserved hypothetical protein			PF09335.6
conserved hypothetical protein			UniRef100_Q3Z298
conserved hypothetical protein			PF09335.6
carboxymuconolactone decarboxylase family protein			PF02627.15
protein ynjB		ynjB	UniRef100_P76223
inner membrane ABC transporter permease protein ynjC		ynjC	UniRef100_P76224
ABC transporter family protein			PF00005.22
thiosulfate sulfurtransferase YnjE	2.8.1.1	ynjE	UniRef100_P78067
inner membrane protein YnjF		ynjF	UniRef100_P76226
conserved hypothetical protein			PF07383.7
CTP pyrophosphohydrolase	3.6.1.-	nudG	UniRef100_P77788
NADP-specific glutamate dehydrogenase	1.4.1.4	gdhA	UniRef100_P00370
inner membrane protein ynjI		ynjI	UniRef100_P76228
DNA topoisomerase 3	5.99.1.2	topB	UniRef100_P14294
selenide, water dikinase	2.7.9.3	selD	TIGR00476
putative NAD(P)H nitroreductase ydjA			UniRef100_P0ACY2
signal peptide peptidase SppA, 67K type	3.4.-.-	sppA	TIGR00705
L-asparaginase 1	3.5.1.1	ansA	UniRef100_P0A963
isochorismatase family protein			PF00857.15
inner membrane metabolite transport protein ydjE		ydjE	UniRef100_P38055
conserved hypothetical protein			UniRef100_P77721
aldo/keto reductase family protein			PF00248.16
conserved hypothetical protein			UniRef100_P77493
ketose-bisphosphate aldolase family protein			TIGR00167
sorbitol dehydrogenase	1.1.1.14	gutB	UniRef100_Q06004
inner membrane metabolite transport protein ydjE		ydjE	UniRef100_P38055
zinc-binding dehydrogenase family protein			PF00107.21
conserved hypothetical protein			PF07023.7
peptide methionine sulfoxide reductase MsrB	1.8.4.12	msrB	UniRef100_A7ZMP8
glyceraldehyde-3-phosphate dehydrogenase, type I	1.2.1.-	gap	TIGR01534
putative glucose-6-phosphate 1-epimerase			UniRef100_P39173
aldo/keto reductase family protein			PF00248.16
mltA-interacting protein		mipA	UniRef100_P0A908
prkA serine kinase C-terminal domain protein			PF06798.7
conserved hypothetical protein			PF04285.7
inner membrane protein YeaI		yeaI	UniRef100_P76236
diguanylate cyclase domain protein			TIGR00254
ybaK / prolyl-tRNA synthetases associated domain protein			PF04073.10
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
conserved hypothetical protein			PF04284.8
cyanate transporter family protein			TIGR00896
conserved hypothetical protein			UniRef100_P76243
conserved hypothetical protein			PF03891.10
putative diguanylate cyclase YeaP			UniRef100_P76245
transglycosylase associated family protein			PF04226.8
protein yoaG		yoaG	UniRef100_P64498
conserved hypothetical protein			UniRef100_P64489
leucine efflux protein		leuE	UniRef100_A8A0Z3
HTH-type transcriptional regulator DmlR		dmlR	UniRef100_P76250
tartrate dehydrogenase	1.1.1.93		TIGR02089
transporter, betaine/carnitine/choline transporter family protein			TIGR00842
rieske [2Fe-2S] domain protein			PF00355.21
2Fe-2S iron-sulfur cluster binding domain protein			PF00111.22
ribonuclease D	3.1.13.5	rnd	TIGR01388
long-chain-fatty-acid--CoA ligase	6.2.1.3	fadD	UniRef100_P69452
outer membrane lipo, Slp family protein			TIGR00752
conserved hypothetical protein			UniRef100_P76256
DEAD/DEAH box helicase family protein			PF00270.24
endoribonuclease L-PSP family protein			PF01042.16
putative cytoplasmic protein			UniRef100_E8NPE9
conserved hypothetical protein			PF03701.9
aminodeoxychorismate synthase, component I	2.6.1.85	pabB	TIGR00553
NUDIX domain protein			PF00293.23
L-serine ammonia-lyase	4.3.1.17		TIGR00720
putative cyclic-di-GMP phosphodiesterase AdrB			UniRef100_P76261
conserved hypothetical protein			UniRef100_P0AEC2
PTS system mannose-specific EIIAB component	2.7.1.69	manX	UniRef100_P69799
PTS system, mannose/fructose/sorbose , IIC component family protein			TIGR00822
PTS system, mannose/fructose/sorbose , IID component family protein			TIGR00828
			
conserved hypothetical protein			UniRef100_A7ZMU2
ribosomal RNA large subunit methyltransferase A	2.1.1.187	rlmA	UniRef100_P36999
conserved hypothetical protein			UniRef100_A7ZMU3
			
cold shock-like protein CspC		cspC	UniRef100_P0A9Y8
yebO-like family protein			PF13974.1
yobH-like family protein			PF13996.1
pectin degradation repressor protein kdgR		kdgR	UniRef100_P37728
sugar (and other) transporter family protein			PF00083.19
protease HtpX	3.4.24.-	htpX	UniRef100_C4ZZI6
tail-specific protease	3.4.21.102	prc	UniRef100_P23865
proP effector		proQ	UniRef100_C4ZZI8
protein yebR		yebR	UniRef100_P76270
inner membrane protein yebS		yebS	UniRef100_P0AD04
conserved hypothetical protein			UniRef100_P76272
ribosomal RNA small subunit methyltransferase F	2.1.1.178	rsmF	UniRef100_C4ZZJ2
conserved hypothetical protein			PF07351.8
conserved hypothetical protein			PF07358.6
serine/threonine-protein phosphatase 1	3.1.3.16	pphA	UniRef100_P55798
conserved hypothetical protein			PF10709.4
inner membrane protein YebZ		yebZ	UniRef100_P76278
protein YobA		yobA	UniRef100_P0AA58
DNA polymerase III subunit theta	2.7.7.7	holE	UniRef100_P0ABT0
carbon-nitrogen hydrolase family protein			PF00795.17
protease 2	3.4.21.83	ptrB	UniRef100_P24555
exodeoxyribonuclease 10	3.1.11.-	exoX	UniRef100_P0AEK1
inner membrane protein yebE		yebE	UniRef100_P33218
protein yebF		yebF	UniRef100_P33219
yebG family protein			PF07130.7
phosphoribosylglycinamide formyltransferase 2	2.1.2.-	purT	TIGR01142
KHG/KDPG aldolase	4.1.2.14	eda	UniRef100_P0A957
phosphogluconate dehydratase	4.2.1.12	edd	TIGR01196
glucose-6-phosphate dehydrogenase	1.1.1.49	zwf	TIGR00871
helix-turn-helix domain, rpiR family protein			PF01418.12
pyruvate kinase	2.7.1.40	pyk	TIGR01064
lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	2.3.1.-	msbB	TIGR02208
lysM domain protein			PF01476.15
high-affinity zinc uptake system protein znuA		znuA	UniRef100_P39172
ABC transporter family protein			PF00005.22
high-affinity zinc uptake system membrane protein znuB		znuB	UniRef100_P39832
holliday junction DNA helicase RuvB	3.6.4.12	ruvB	TIGR00635
holliday junction DNA helicase RuvA	3.6.4.12	ruvA	TIGR00084
conserved hypothetical protein			PF05708.7
crossover junction endodeoxyribonuclease RuvC	3.1.22.4	ruvC	TIGR00228
DNA-binding regulatory , YebC/PmpR family protein			TIGR01033
dihydroneopterin triphosphate pyrophosphatase	3.6.1.-	nudB	UniRef100_P0AFC1
aspartate--tRNA ligase	6.1.1.-	aspS	TIGR00459
isochorismatase family protein			PF00857.15
conserved hypothetical protein			UniRef100_P37348
inner membrane protein yecN		yecN	UniRef100_P64516
tRNA (cmo5U34)-methyltransferase	2.1.1.-	cmoA	TIGR00740
tRNA (mo5U34)-methyltransferase	2.1.1.-	cmoB	TIGR00452
trimethylamine-N-oxide reductase 2	1.7.2.3	torZ	UniRef100_P46923
cytochrome c-type protein TorY		torY	UniRef100_P52005
copper homeostasis protein CutC		cutC	UniRef100_A7ZN00
protein yecM		yecM	UniRef100_P52007
arginine--tRNA ligase	6.1.1.19	argS	TIGR00456
conserved hypothetical protein			PF07007.7
flagellar protein flhE		flhE	UniRef100_P0A1N5
flagellar biosynthesis protein FlhA		flhA	TIGR01398
flagellar biosynthetic protein FlhB		flhB	TIGR00328
protein phosphatase CheZ	3.1.3.-	cheZ	UniRef100_P07800
chemotaxis protein CheY		cheY	UniRef100_P0AE68
cheB methylesterase family protein			PF01339.12
chemotaxis protein methyltransferase	2.1.1.80	cheR	UniRef100_P07801
methyl-accepting chemotaxis protein IV		tap	UniRef100_P07018
methyl-accepting chemotaxis protein II		tar	UniRef100_P07017
cheW-like domain protein			PF01584.14
chemotaxis protein CheA	2.7.13.3	cheA	UniRef100_P07363
motility protein B		motB	UniRef100_P0AF07
flagellar motor stator protein MotA		motA	TIGR03818
flagellar transcriptional regulator FlhC		flhC	UniRef100_P0ABY9
flagellar transcriptional activator family protein			PF05247.8
putative transposase			PF03400.8
			
universal stress family protein			PF00582.21
alpha,alpha-trehalose-phosphate synthase	2.4.1.15	otsA	TIGR02400
trehalose-phosphatase	3.1.3.12	otsB	TIGR00685
branched-chain amino acid transport system / permease component family protein			PF02653.11
arabinose import ATP-binding protein AraG	3.6.3.17	araG	UniRef100_P0AAF5
periplasmic binding s and sugar binding domain of LacI family protein			PF00532.16
ferritin-like domain protein			PF00210.19
conserved hypothetical protein			PF10964.3
			
ferritin-1	1.16.3.1	ftnA	UniRef100_P0A9A0
conserved hypothetical protein			PF10678.4
tyrosine-specific transport protein		tyrP	UniRef100_P0AAD4
yecA family protein			TIGR02292
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	2.7.8.5	pgsA	TIGR00560
excinuclease ABC subunit C	3.1.25.-	uvrC	TIGR00194
response regulator		uvrY	UniRef100_P0AED5
conserved hypothetical protein			PF10769.4
regulatory protein SdiA		sdiA	UniRef100_P07026
ABC transporter family protein			PF00005.22
inner membrane amino-acid ABC transporter permease protein yecS		yecS	UniRef100_P0AFT3
D-cysteine desulfhydrase	4.4.1.15	dcyD	UniRef100_B7L8T2
bacterial extracellular solute-binding s, 3 family protein			PF00497.15
flagellar regulatory protein FliZ		fliZ	TIGR03823
RNA polymerase sigma factor for flagellar operon		fliA	UniRef100_P0A2E9
flagellin		fliC	UniRef100_P04949
flagellar hook-associated protein 2		fliD	UniRef100_P24216
flagellar protein FliS		fliS	TIGR00208
flagellar protein FliT		fliT	UniRef100_A1JSR8
alpha amylase, catalytic domain protein			PF00128.19
yedD-like family protein			PF13987.1
conserved hypothetical protein			UniRef100_P31064
conserved hypothetical protein			UniRef100_E5Z7Z7
conserved hypothetical protein			UniRef100_P76318
conserved hypothetical protein			UniRef100_P76319
			
			
flagellar hook-basal body complex protein FliE		fliE	TIGR00205
flagellar M-ring protein FliF		fliF	TIGR00206
flagellar motor switch protein FliG		fliG	TIGR00207
hrpE/YscL/FliH and V-type ATPase subunit E family protein			PF06188.7
flagellar protein export ATPase FliI	3.6.3.14	fliI	TIGR03496
flagellar export protein FliJ		fliJ	TIGR02473
flagellar hook-length control protein		fliK	UniRef100_P26416
flagellar basal body-associated FliL family protein			PF03748.9
flagellar motor switch protein FliM		fliM	TIGR01397
flagellar motor switch protein FliN		fliN	TIGR02480
flagellar biosynthetic protein FliO		fliO	TIGR03500
flagellar biosynthetic protein FliP		fliP	TIGR01103
flagellar biosynthetic protein FliQ		fliQ	TIGR01402
flagellar biosynthetic protein FliR		fliR	TIGR01400
colanic acid capsular biosynthesis activation protein A		rcsA	UniRef100_P69406
dextransucrase DSRB family protein			PF10781.4
conserved hypothetical protein			PF10733.4
diguanylate cyclase domain protein			TIGR00254
putative mannosyl-3-phosphoglycerate phosphatase			UniRef100_C4ZQM8
conserved hypothetical protein			UniRef100_P64518
inner membrane protein yedI		yedI	UniRef100_P46125
very short patch repair protein	3.1.-.-	vsr	UniRef100_P09184
conserved hypothetical protein			UniRef100_P0AA72
DNA-cytosine methyltransferase	2.1.1.37	dcm	UniRef100_P0AEE0
conserved hypothetical protein			UniRef100_P46144
inner membrane protein yedR		yedR	UniRef100_P76334
gram-negative porin family protein			PF00267.16
gram-negative porin family protein			PF00267.16
gram-negative porin family protein			PF00267.16
DJ-1/PfpI family protein			PF01965.19
putative sensor-like histidine kinase yedV			UniRef100_P76339
putative transcriptional regulatory protein yedW			UniRef100_P76340
hydroxyisourate hydrolase	3.5.2.17	uraH	TIGR02962
sulfoxide reductase catalytic subunit yedY	1.8.-.-	yedY	UniRef100_P76342
ferric reductase like transmembrane component family protein			PF01794.14
metal-binding protein ZinT		zinT	UniRef100_P76344
conserved hypothetical protein			UniRef100_P76345
protein mtfA		mtfA	UniRef100_A6TB83
bacterial Ig-like domain family protein			PF02369.11
putative predicted protein, N-terminal fragment			UniRef100_P76349
H+ symporter family protein			TIGR00883
AMP nucleosidase	3.2.2.4	amn	TIGR01717
conserved hypothetical protein			UniRef100_Q0TGH3
MATE efflux family protein			TIGR00797
HTH-type transcriptional regulator cbl		cbl	UniRef100_Q47083
nitrogen assimilation regulatory protein nac		nac	UniRef100_Q47005
putative L,D-transpeptidase ErfK/SrfK			UniRef100_P39176
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	2.4.2.21	cobT	TIGR03160
cobalamin 5'-phosphate synthase	2.7.8.26	cobS	TIGR00317
bifunctional adenosylcobalamin biosynthesis protein CobU	2.7.7.62	cobU	UniRef100_Q05599
transposase DDE domain protein			PF01609.16
conserved hypothetical protein			UniRef100_D8CLM5
integrase core domain protein			PF00665.21
			
transposase family protein			PF01527.15
tonB-dependent Receptor Plug domain protein			PF07715.10
putative gTPase-like protein			UniRef100_P76359
			
antigen 43		flu	UniRef100_P39180
inner membrane protein yeeR		yeeR	UniRef100_P76361
conserved hypothetical protein			UniRef100_Q47685
conserved hypothetical protein			PF06174.6
antitoxin YeeU		yeeU	UniRef100_P76364
toxin CbtA		cbtA	UniRef100_P64525
conserved hypothetical protein			UniRef100_P64527
conserved hypothetical protein			UniRef100_P44117
inner membrane protein yeeA		yeeA	UniRef100_P33011
gyrI-like small molecule binding domain protein			PF06445.10
D-alanyl-D-alanine carboxypeptidase dacD	3.4.16.4	dacD	UniRef100_P33013
exodeoxyribonuclease I	3.1.11.1	sbcB	UniRef100_P04995
sirA-like family protein			PF01206.12
conserved hypothetical protein			UniRef100_P33015
inner membrane transport protein YeeF		yeeF	UniRef100_P0AA48
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
protein yeeZ		yeeZ	UniRef100_P0AD13
addiction module toxin, Txe/YoeB family			TIGR02116
antitoxin YefM		yefM	UniRef100_P69347
ATP phosphoribosyltransferase	2.4.2.17	hisG	TIGR00070
histidinol dehydrogenase	1.1.1.23	hisD	UniRef100_P06988
histidinol-phosphate transaminase	2.6.1.9	hisC	TIGR01141
histidine biosynthesis bifunctional protein hisB	4.2.1.19	hisB	UniRef100_P06987
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit	2.4.2.-	hisH	TIGR01855
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase	5.3.1.16	hisA	TIGR00007
imidazole glycerol phosphate synthase subunit hisF	4.1.3.-	hisF	UniRef100_B7UT62
phosphoribosyl-ATP diphosphatase	3.6.1.31	hisE	TIGR03188
chain length determinant protein		wzzB	UniRef100_P76372
UDP-glucose 6-dehydrogenase	1.1.1.22	ugd	UniRef100_P76373
6-phosphogluconate dehydrogenase	1.1.1.44	gnd	TIGR00873
			
transposase DDE domain protein			PF01609.16
glycosyl transferase 2 family protein			PF00535.21
glycosyl transferases group 1 family protein			PF00534.15
			
putative glycosyltransferase			UniRef100_P37749
putative membrane protein			TMHMM
UDP-galactopyranose mutase	5.4.99.9	glf	TIGR00031
putative O-antigen transporter			UniRef100_P37746
			
glucose-1-phosphate thymidylyltransferase	2.7.7.24	rfbA	TIGR01207
dTDP-4-dehydrorhamnose reductase	1.1.1.133	rfbD	TIGR01214
dTDP-glucose 4,6-dehydratase	4.2.1.46	rfbB	TIGR01181
regulatory protein GalF		galF	TIGR01105
colanic acid biosynthesis protein WcaM		wcaM	TIGR04004
colanic acid biosynthesis glycosyltransferase WcaL	2.4.-.-	wcaL	TIGR04005
colanic acid biosynthesis pyruvyl transferase WcaK	2.-.-.-	wcaK	TIGR04006
lipopolysaccharide biosynthesis protein wzxC		wzxC	UniRef100_P77377
undecaprenyl-phosphate glucose phosphotransferase	2.7.8.-		TIGR03023
phosphoglucomutase/phosphomannomutase, C-terminal domain protein			PF00408.15
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	5.3.1.8		TIGR01479
colanic acid biosynthesis glycosyltransferase WcaI	2.4.-.-	wcaI	TIGR04007
GDP-mannose mannosyl hydrolase	3.6.1.-	nudD	UniRef100_P32056
GDP-L-fucose synthase	1.1.1.271	fcl	UniRef100_P32055
GDP-mannose 4,6-dehydratase	4.2.1.47	gmd	TIGR01472
colanic acid biosynthesis acetyltransferase WcaF	2.3.1.-	wcaF	TIGR04008
colanic acid biosynthesis glycosyltransferase WcaE	2.4.-.-	wcaE	TIGR04009
putative colanic acid polymerase WcaD			TIGR04010
colanic acid biosynthesis glycosyltransferase WcaC	2.4.-.-	wcaC	TIGR04015
colanic acid biosynthesis acetyltransferase WcaB	2.3.1.-	wcaB	TIGR04016
colanic acid biosynthesis glycosyltransferase WcaA	2.4.-.-	wcaA	TIGR04017
tyrosine-protein kinase wzc	2.7.10.-	wzc	UniRef100_P76387
low molecular weight protein-tyrosine-phosphatase wzb	3.1.3.48	wzb	UniRef100_P0AAB3
putative outer membrane lipoprotein Wza			UniRef100_Q9X4B7
transporter associated domain protein			PF03471.12
asmA family protein			PF05170.9
deoxycytidine triphosphate deaminase	3.5.4.13	dcd	TIGR02274
uridine kinase	2.7.1.48	udk	TIGR00235
diguanylate cyclase domain protein			TIGR00254
DNA-3-methyladenine glycosylase 2	3.2.2.21	alkA	UniRef100_P04395
hsp70 family protein			PF00012.15
conserved hypothetical protein			UniRef100_Q1RA00
conserved hypothetical protein			PF10077.4
phosphatase 2C family protein			PF13672.1
von Willebrand factor type A domain protein			PF00092.23
efflux transporter, RND family, MFP subunit			TIGR01730
export membrane family protein			PF02355.11
multidrug resistance protein MdtC		mdtC	UniRef100_C4ZSG4
putative multidrug resistance protein mdtD			UniRef100_C4ZSG5
HAMP domain protein			PF00672.20
transcriptional regulatory , C terminal family protein			PF00486.23
putative two-component system protein			UniRef100_E9WG90
conserved hypothetical protein			UniRef100_P76402
peptidase U32 family protein			PF01136.14
ogr/Delta-like zinc finger family protein			PF04606.7
conserved hypothetical protein			UniRef100_P76406
lipid kinase YegS	2.7.1.-	yegS	TIGR03702
deoR C terminal sensor domain protein			PF00455.17
transposase family protein			PF01527.15
deoR-like helix-turn-helix domain protein			PF08220.7
integrase core domain protein			PF00665.21
zinc-binding dehydrogenase family protein			PF00107.21
galactitol permease IIC component		gatC	UniRef100_P69832
galactitol-specific phosphotransferase enzyme IIB component	2.7.1.69	gatB	UniRef100_P37188
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein			PF00359.17
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit	4.1.2.40		TIGR02810
class II aldolase, tagatose bisphosphate family	4.1.2.-		TIGR01858
fructose-bisphosphate aldolase class 1	4.1.2.13	fbaB	UniRef100_P0A992
putative nucleoside transporter yegT			UniRef100_P76417
ADP-ribosylglycohydrolase family protein			PF03747.9
conserved hypothetical protein			UniRef100_P0ACM7
pfkB carbohydrate kinase family protein			PF00294.19
glycosyl hydrolases 25 family protein			PF01183.15
hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	2.7.4.7	thiD	UniRef100_P76422
hydroxyethylthiazole kinase	2.7.1.50	thiM	TIGR00694
transcriptional repressor rcnR		rcnR	UniRef100_A7ZNS4
nickel/cobalt efflux system rcnA		rcnA	UniRef100_P76425
conserved hypothetical protein			PF11776.3
fimbrial family protein			PF00419.15
type VII secretion system (T7SS), usher family protein			PF00577.15
gram-negative pili assembly chaperone, C-terminal domain protein			PF02753.12
fimbrial family protein			PF00419.15
conserved hypothetical protein			PF10836.3
cobQ/CobB/MinD/ParA nucleotide binding domain protein			PF01656.18
methionyl-tRNA synthetase	6.1.1.10	metG	UniRef100_C4ZSJ8
WGR domain protein			PF05406.10
putative molybdate metabolism regulator domain protein			UniRef100_P33345
conserved hypothetical protein			PF13569.1
conserved hypothetical protein			PF13569.1
			
AAA domain family protein			PF07728.9
conserved hypothetical protein			UniRef100_P33349
von Willebrand factor type A domain protein			PF00092.23
SWIM zinc finger family protein			PF04434.12
putative yehQ domain protein			UniRef100_E7IBC9
conserved hypothetical protein			UniRef100_P33354
conserved hypothetical protein			PF07308.8
response regulator			PF00072.19
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein			PF02518.21
HTH-type transcriptional repressor YcgE		ycgE	UniRef100_P75989
putative osmoprotectant uptake system permease protein yehW			UniRef100_P33359
ABC transporter family protein			PF00005.22
putative osmoprotectant uptake system permease protein yehY			UniRef100_P33361
substrate binding domain of ABC-type glycine betaine transport system family protein			PF04069.7
periplasmic beta-glucosidase	3.2.1.21	bglX	UniRef100_P33363
conserved hypothetical protein			UniRef100_D8C5G3
D-lactate dehydrogenase	1.1.1.28	dld	UniRef100_P06149
D-alanyl-D-alanine endopeptidase	3.4.21.-	pbpG	UniRef100_P0AFI5
inner membrane protein yohC		yohC	UniRef100_P0AD18
inner membrane protein yohD		yohD	UniRef100_P33366
short chain dehydrogenase family protein			PF00106.20
efflux transporter, outer membrane factor (OMF) lipo, NodT family protein			TIGR01845
conserved hypothetical protein			UniRef100_D8BXI2
tRNA-dihydrouridine synthase C	1.-.-.-	dusC	UniRef100_P33371
lrgA family protein			PF03788.9
inner membrane protein yohK		yohK	UniRef100_P0AD19
cytidine deaminase	3.5.4.5	cdd	TIGR01355
conserved hypothetical protein			PF02698.12
conserved hypothetical protein			PF10808.3
NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT	1.3.1.1	yeiT	UniRef100_P76440
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	1.3.1.1	yeiA	UniRef100_Q8X643
branched-chain amino acid transport system / permease component family protein			PF02653.11
galactose/methyl galactoside import ATP-binding protein MglA	3.6.3.17	mglA	UniRef100_P23924
D-galactose-binding periplasmic protein		mglB	UniRef100_P0AEE6
bacterial regulatory s, lacI family protein			PF00356.16
conserved hypothetical protein			PF04235.7
GTP cyclohydrolase I	3.5.4.16	folE	TIGR00063
S-formylglutathione hydrolase	3.1.2.12	fghA	TIGR02821
colicin I receptor		cirA	UniRef100_P17315
lysine-specific permease		lysP	UniRef100_P25737
conserved hypothetical protein			UniRef100_D7Y4R2
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			UniRef100_P62724
apurinic endonuclease family protein			TIGR00587
pfkB carbohydrate kinase family protein			PF00294.19
nucleoside permease nupX		nupX	UniRef100_P33021
pyrimidine-specific ribonucleoside hydrolase rihB	3.2.2.8	rihB	UniRef100_A7ZNY5
regulatory protein nsr		nsr	UniRef100_P0A9F0
putative pseudouridine transporter			UniRef100_P33024
pseudouridine-5'-phosphate glycosidase	3.2.-.-	psuG	UniRef100_P33025
pseudouridine kinase	2.7.1.83	psuK	UniRef100_P30235
PTS system, Fru family, IIB component domain protein	2.7.1.69		TIGR00829
1-phosphofructokinase	2.7.1.56	pfkB	TIGR03828
phosphocarrier, HPr family protein			TIGR01003
putative uPF0153 protein yeiW			UniRef100_P0AFT9
sugar efflux transporter B		setB	UniRef100_P33026
putative uPF0153 protein yeiW			UniRef100_P0AFT9
elongation factor P-like protein		yeiP	UniRef100_A7ZNZ5
mannitol dehydrogenase Rossmann domain protein			PF01232.18
cobW/HypB/UreG, nucleotide-binding domain protein			PF02492.14
inner membrane protein yeiU		yeiU	UniRef100_P76445
lipoprotein spr		spr	UniRef100_P0AFV6
EAL domain protein			PF00563.15
bacterial extracellular solute-binding s, 5 Middle family protein			PF00496.17
inner membrane ABC transporter permease protein yejB		yejB	UniRef100_P0AFU1
inner membrane ABC transporter permease protein yejE		yejE	UniRef100_P33915
nickel import ATP-binding protein NikE	3.6.3.24	nikE	TIGR02769
yejG-like family protein			PF13989.1
bicyclomycin resistance protein		bcr	UniRef100_P28246
ribosomal small subunit pseudouridine synthase A	5.4.99.19	rsuA	UniRef100_P0AA45
helicase conserved C-terminal domain protein			PF00271.26
50S ribosomal protein L25		rplY	UniRef100_A7ZP09
nucleoid-associated protein YejK		yejK	UniRef100_C4ZU31
conserved hypothetical protein			UniRef100_B7LAL1
inner membrane protein yejM		yejM	UniRef100_P0AD29
outer membrane autotransporter barrel domain protein			TIGR01414
transposase DDE domain protein			PF01609.16
bacterial regulatory s, luxR family protein			PF00196.14
cytochrome c-type biogenesis protein CcmH		ccmH	UniRef100_P0ABM9
thiol:disulfide interchange protein DsbE		dsbE	UniRef100_P0AA87
cytochrome c-type biogenesis protein CcmF		ccmF	TIGR00353
cytochrome c-type biogenesis protein CcmE		ccmE	UniRef100_A7ZP19
heme exporter protein CcmD		ccmD	TIGR03141
heme exporter CcmC family protein		ccmC	TIGR01191
heme exporter protein CcmB		ccmB	TIGR01190
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein			TIGR02161
diheme cytochrome c NapB		napB	UniRef100_Q53177
ferredoxin-type , NapH/MauN family protein			TIGR02163
mauM/NapG ferredoxin-type family protein			TIGR00397
periplasmic nitrate reductase, large subunit	1.7.99.4	napA	TIGR01706
napD family protein			PF03927.8
ferredoxin-type protein NapF		napF	TIGR00402
putative triose phosphate isomerase monomer			UniRef100_A5A619
ecotin family protein			PF03974.8
malate dehydrogenase	1.1.5.4	mqo	TIGR01320
ABC transporter ATP-binding protein YojI		yojI	UniRef100_P33941
alkylated DNA repair protein AlkB		alkB	TIGR00568
bifunctional transcriptional activator/DNA repair enzyme Ada	2.1.1.63	ada	UniRef100_P06134
thiamine biosynthesis lipoprotein ApbE		apbE	UniRef100_P0AB86
outer membrane protein C		ompC	UniRef100_P06996
sensor-like histidine kinase RcsD	2.7.13.3	rcsD	UniRef100_P39838
capsular synthesis regulator component B		rcsB	UniRef100_P69409
sensor kinase protein RcsC	2.7.13.3	rcsC	UniRef100_P14376
sensory box protein			TIGR00229
AAA domain family protein			PF07728.9
acetate CoA-transferase subunit alpha	2.8.3.8	atoD	UniRef100_P76458
acetate CoA-transferase subunit beta	2.8.3.8	atoA	UniRef100_P76459
short-chain fatty acids transporter		atoE	UniRef100_P76460
acetyl-CoA C-acetyltransferase family protein			TIGR01930
conserved hypothetical protein			PF09906.4
stage II sporulation family protein			PF08486.5
alpha-2-macroglobulin family domain protein			UniRef100_F5N568
alpha-2-macroglobulin N-terminal region family protein			PF07703.9
conserved hypothetical protein			PF06672.6
conserved hypothetical protein			PF09909.4
DNA gyrase, A subunit	5.99.1.3	gyrA	TIGR01063
3-demethylubiquinone-9 3-O-methyltransferase	2.1.1.64	ubiG	TIGR01983
outer membrane autotransporter barrel domain protein			TIGR01414
ribonucleoside-diphosphate reductase, alpha subunit	1.17.4.1		TIGR02506
ribonucleoside-diphosphate reductase 1 subunit beta	1.17.4.1	nrdB	UniRef100_P69925
2Fe-2S iron-sulfur cluster binding domain protein			PF00111.22
protein inaA		inaA	UniRef100_P27294
conserved hypothetical protein			UniRef100_P45505
glycerophosphoryl diester phosphodiesterase	3.1.4.46	glpQ	UniRef100_P09394
glycerol-3-phosphate transporter		glpT	TIGR00712
glycerol-3-phosphate dehydrogenase, anaerobic, A subunit	1.1.5.3	glpA	TIGR03377
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit	1.1.5.3	glpB	TIGR03378
glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	1.1.5.3	glpC	TIGR03379
conserved hypothetical family protein			TIGR01784
conserved hypothetical protein			UniRef100_B7MXS5
2-keto-3-deoxy-L-rhamnonate aldolase	4.1.2.n3	rhmA	UniRef100_C4ZU87
inner membrane transport protein RhmT		rhmT	UniRef100_P76470
L-rhamnonate dehydratase	4.2.1.90	rhmD	UniRef100_C4ZU89
conserved hypothetical protein			UniRef100_P77732
cinA-like protein		yfaY	UniRef100_C4ZU91
yfaZ family protein			PF07437.6
NUDIX domain protein			PF00293.23
histidine phosphatase super family protein			PF00300.17
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	2.6.1.87	arnB	UniRef100_C4ZU95
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	2.7.8.30	arnC	UniRef100_B7LAR9
bifunctional polymyxin resistance protein ArnA	1.1.1.305	arnA	UniRef100_C4ZU97
putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD			UniRef100_B1X8W9
undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	2.4.2.43	arnT	UniRef100_B1X8X0
putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE			UniRef100_A7ZP76
signal transduction protein pmrD		pmrD	UniRef100_P37590
putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF			UniRef100_B1X8X2
O-succinylbenzoate-CoA ligase	6.2.1.26	menE	TIGR01923
o-succinylbenzoate synthase	4.2.1.113	menC	TIGR01927
naphthoate synthase	4.1.3.36	menB	TIGR01929
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	4.2.99.20	menH	TIGR03695
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	2.2.1.9	menD	TIGR00173
menaquinone-specific isochorismate synthase	5.4.4.2	menF	UniRef100_P38051
protein elaB		elaB	UniRef100_P0AEH7
acetyltransferase family protein			PF00583.19
ribonuclease Z	3.1.26.11	rnz	TIGR02651
protease elaD	3.4.22.-	elaD	UniRef100_Q47013
conserved hypothetical protein			UniRef100_P76481
peptidase M20/M25/M40 family protein			PF01546.23
protein yfbM		yfbM	UniRef100_P76483
conserved hypothetical protein			UniRef100_P76484
conserved hypothetical protein			UniRef100_P76485
tetratricopeptide repeat family protein			PF13432.1
NADH-quinone oxidoreductase subunit N	1.6.99.5	nuoN	UniRef100_A7ZP90
NADH-quinone oxidoreductase subunit M	1.6.99.5	nuoM	UniRef100_P0AFE9
NADH-quinone oxidoreductase subunit L	1.6.99.5	nuoL	UniRef100_P33607
NADH-quinone oxidoreductase subunit K	1.6.99.5	nuoK	UniRef100_A8ADW0
NADH-quinone oxidoreductase subunit J	1.6.99.5	nuoJ	UniRef100_P0AFE2
NADH-quinone oxidoreductase, chain I family protein			TIGR01971
NADH-quinone oxidoreductase subunit H	1.6.99.5	nuoH	UniRef100_A7ZP96
NADH dehydrogenase (quinone), G subunit	1.6.99.5	nuoG	TIGR01973
NADH oxidoreductase (quinone), F subunit	1.6.99.5	nuoF	TIGR01959
NADH-quinone oxidoreductase subunit E	1.6.99.5	nuoE	UniRef100_P0AFD2
NADH-quinone oxidoreductase subunit C/D	1.6.99.5	nuoC	UniRef100_B1X8Z8
NADH-quinone oxidoreductase subunit B	1.6.99.5	nuoB	UniRef100_A7ZPA1
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein			PF00507.14
			
transcriptional regulator LrhA		lrhA	UniRef100_A7FGQ3
conserved hypothetical protein			UniRef100_P0A960
5'-nucleotidase yfbR	3.1.3.5	yfbR	UniRef100_C4ZVI4
citrate transporter family protein			PF03600.11
HAD hydrolase, IA, variant 1 family protein			TIGR01549
conserved hypothetical protein			UniRef100_B7MG58
conserved hypothetical protein			UniRef100_A7ZPA9
acetate kinase	2.7.2.1	ackA	TIGR00016
phosphate acetyltransferase	2.3.1.8	pta	TIGR00651
C4-dicarboxylate anaerobic carrier family protein			PF03606.10
conserved hypothetical protein			UniRef100_P65558
phosphodiesterase yfcE	3.1.4.-	yfcE	UniRef100_P67097
conserved hypothetical protein			UniRef100_P77544
putative disulfide bond reductase yfcG			UniRef100_P77526
D-erythro-7,8-dihydroneopterin triphosphate epimerase	5.-.-.-	folX	UniRef100_P0AC21
NAD dependent epimerase/dehydratase family protein			PF01370.16
conserved hypothetical family protein			TIGR01784
ABC transporter family protein			PF00005.22
histidine transport system permease protein hisM		hisM	UniRef100_P0A2I8
histidine transport system permease protein hisQ		hisQ	UniRef100_P0A2J0
histidine-binding periplasmic protein		hisJ	UniRef100_P02910
lysine-arginine-ornithine-binding periplasmic protein		argT	UniRef100_P02911
polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein	4.1.1.-		TIGR00421
amidophosphoribosyltransferase	2.4.2.14	purF	TIGR01134
colicin V production protein		cvpA	UniRef100_P08550
sporulation related domain protein			PF05036.8
bifunctional protein folC	6.3.2.12	folC	UniRef100_P08192
acetyl-CoA carboxylase, carboxyl transferase, beta subunit	6.4.1.2	accD	TIGR00515
protein dedA		dedA	UniRef100_P0ABP7
tRNA pseudouridine(38-40) synthase	5.4.99.12	truA	TIGR00071
semialdehyde dehydrogenase, NAD binding domain protein			PF01118.19
erythronate-4-phosphate dehydrogenase	1.1.1.290	pdxB	UniRef100_B5EZQ4
conserved hypothetical protein			UniRef100_P77549
flagellar regulator flk		flk	UniRef100_Q7CQ37
3-oxoacyl-[acyl-carrier-protein] synthase 1	2.3.1.41	fabB	UniRef100_P0A954
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	1.5.-.-	mnmC	UniRef100_B1X935
yfcL family protein			PF08891.6
conserved hypothetical protein			PF04315.7
conserved hypothetical protein			UniRef100_P0AD32
penicillin-insensitive murein endopeptidase	3.4.24.-	mepA	UniRef100_C4ZVM1
chorismate synthase	4.2.3.5	aroC	TIGR00033
-(glutamine-N5) methyltransferase, ribosomal protein L3-specific	2.1.1.-	prmB	TIGR03533
smr domain protein			PF01713.16
conserved hypothetical protein			PF11245.3
fimbrial family protein			PF00419.15
fimbrial family protein			PF00419.15
fimbrial family protein			PF00419.15
gram-negative pili assembly chaperone, C-terminal domain protein			PF02753.12
type VII secretion system (T7SS), usher family protein			PF00577.15
type VII secretion system (T7SS), usher family protein			PF00577.15
fimbrial family protein			PF00419.15
phosphohistidine phosphatase SixA	3.1.3.-	sixA	TIGR00249
fatty oxidation complex, alpha subunit FadJ	4.2.1.17	fadJ	TIGR02440
acetyl-CoA C-acyltransferase FadI	2.3.1.16	fadI	TIGR02446
conserved hypothetical family protein			TIGR00743
outer membrane transport family protein			PF03349.11
conserved hypothetical protein			UniRef100_P76505
putative phospholipid-binding lipoprotein mlaA			UniRef100_P76506
inner membrane protein yfdC		yfdC	UniRef100_P37327
putative prophage CPS-53 integrase			UniRef100_P37326
conserved hypothetical protein			UniRef100_P77293
putative membrane protein			TMHMM
caudovirales tail fibre assembly family protein			PF02413.12
caudovirales tail fibre assembly family protein			PF02413.12
conserved hypothetical protein			UniRef100_E9TVE9
phage N-6-adenine-methyltransferase	2.1.1.72		TIGR01712
perC transcriptional activator family protein			PF06069.6
conserved hypothetical protein			UniRef100_P0AD36
putative phage O domain protein			UniRef100_E3PDN3
conserved hypothetical protein			UniRef100_P76512
conserved hypothetical protein			PF10065.4
conserved hypothetical protein			UniRef100_D6ING5
conserved hypothetical protein			UniRef100_P76515
conserved hypothetical protein			UniRef100_P76516
prophage CP4-57 regulatory family protein			PF05930.7
D-serine deaminase transcriptional activator		dsdC	TIGR02036
dsdX permease		dsdX	UniRef100_P08555
D-serine ammonia-lyase	4.3.1.18	dsdA	TIGR02035
multidrug resistance protein B		emrB	UniRef100_P0AEJ1
efflux pump membrane family protein			TIGR00998
positive transcription regulator evgA		evgA	UniRef100_P0ACZ6
sensor protein evgS	2.7.13.3	evgS	UniRef100_P30855
coA-transferase III family protein			PF02515.12
membrane transport family protein			PF03547.13
oxalyl-CoA decarboxylase	4.1.1.8	oxc	TIGR03254
formyl-CoA transferase	2.8.3.16	frc	TIGR03253
protein yfdX		yfdX	UniRef100_P76520
			
conserved hypothetical protein			PF10810.3
lipid A biosynthesis lauroyl acyltransferase	2.3.1.-	htrB	UniRef100_P0ACV1
aminotransferase class I and II family protein			PF00155.16
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein			PF02518.21
response regulator		ypdB	UniRef100_P0AE40
conserved hypothetical protein			UniRef100_P77396
multiphosphoryl transfer protein 1	2.7.1.-	fryA	UniRef100_P77439
aminopeptidase ypdE	3.4.11.-	ypdE	UniRef100_P77585
aminopeptidase ypdF	3.4.11.-	ypdF	UniRef100_P76524
fructose-like permease IIC component 1		fryC	UniRef100_P77579
fructose-like phosphotransferase enzyme IIB component 1	2.7.1.69	fryB	UniRef100_P69810
glucokinase	2.7.1.2	glk	TIGR00749
voltage gated chloride channel family protein			PF00654.15
conserved hypothetical protein			PF10697.4
manganese transport protein mntH		mntH	UniRef100_A7ZPK2
nucleoside permease nupC		nupC	UniRef100_P0AFF3
transposase DDE domain protein			PF01609.16
EAL domain protein			PF00563.15
conserved hypothetical protein			PF07037.6
helix-turn-helix family protein			PF01381.17
glutamate--tRNA ligase	6.1.1.17	gltX	TIGR00464
HTH-type transcriptional regulator xapR		xapR	UniRef100_P23841
xapX domain protein			TIGR03510
xanthosine permease		xapB	UniRef100_P45562
xanthosine phosphorylase	2.4.2.1	xapA	TIGR01699
nucleoside-specific channel-forming , Tsx family protein			PF03502.8
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			PF12843.2
conserved hypothetical protein			PF13593.1
DNA ligase, NAD-dependent	6.5.1.2	ligA	TIGR00575
cell division protein ZipA		zipA	TIGR02205
protein CysZ		cysZ	UniRef100_B7UGB4
cysteine synthase A	2.5.1.47	cysK	TIGR01139
phosphocarrier protein HPr	2.7.11.-	ptsH	UniRef100_P0AA06
phosphoenolpyruvate-protein phosphotransferase	2.7.3.9	ptsI	UniRef100_P08839
glucose-specific phosphotransferase enzyme IIA component	2.7.1.-	crr	UniRef100_P69784
pyridoxal kinase	2.7.1.35		TIGR00687
conserved hypothetical protein			UniRef100_Q47702
WGR domain protein			PF05406.10
cysteine synthase B	2.5.1.47	cysM	TIGR01138
			
sulfate ABC transporter, ATP-binding family protein	3.6.3.25	cysA	TIGR00968
sulfate ABC transporter, permease protein CysW		cysW	TIGR02140
sulfate ABC transporter, permease protein CysT		cysT	TIGR02139
thiosulfate-binding protein		cysP	UniRef100_P16700
oxidoreductase ucpA	1.-.-.-	ucpA	UniRef100_P37440
helix-turn-helix domain, rpiR family protein			PF01418.12
N-acetylmuramic acid 6-phosphate etherase		murQ	TIGR00274
PTS system N-acetylmuramic acid-specific EIIBC component	2.7.1.69	murP	UniRef100_P77272
beta-lactamase family protein			PF00144.19
dyp-type peroxidase family protein			TIGR01413
conserved hypothetical protein			UniRef100_P76537
inner membrane protein yfeZ		yfeZ	UniRef100_P76538
acetyltransferase family protein			PF00583.19
N-acetylmuramoyl-L-alanine amidase AmiA	3.5.1.28	amiA	UniRef100_P36548
coproporphyrinogen-III oxidase, aerobic	1.3.3.3	hemF	UniRef100_C4ZX09
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
ethanolamine utilization protein EutK		eutK	UniRef100_P76540
ethanolamine utilization protein EutL		eutL	UniRef100_P76541
ethanolamine ammonia-lyase light chain	4.3.1.7	eutC	UniRef100_B7MHU1
ethanolamine ammonia-lyase heavy chain	4.3.1.7	eutB	UniRef100_P0AEJ7
phage integrase family protein			PF00589.17
			
conserved hypothetical protein			UniRef100_P76543
conserved hypothetical protein			UniRef100_P76544
			
AT hook motif family protein			PF02178.14
putative d-sedoheptulose 7-phosphate isomerase			UniRef100_P76547
putative ilvM			UniRef100_P76548
putative predicted enzyme IIC component of PTS			UniRef100_P76549
putative cPZ-55 prophage; predicted protein			UniRef100_P76550
ethanolamine utilization EutA family protein			PF06277.6
ethanolamine utilization , EutH family protein			PF04346.7
ethanolamine utilization protein EutG	1.1.-.-	eutG	UniRef100_P76553
ethanolamine utilization EutJ family protein			TIGR02529
aldehyde dehydrogenase family protein			PF00171.17
ethanolamine utilization protein eutN		eutN	UniRef100_P0AEJ9
ethanolamine utilization protein EutM		eutM	UniRef100_P0ABF5
phosphate acetyltransferase	2.3.1.8	pta	TIGR00651
cobalamin adenosyltransferase family protein			PF01923.13
ethanolamine utilization protein eutQ		eutQ	UniRef100_Q9ZFV5
ethanolamine utilization protein, EutP		eutP	TIGR02528
ethanolamine utilization protein EutS		eutS	UniRef100_P63747
NADP-dependent malic enzyme	1.1.1.40	maeB	UniRef100_P76558
transaldolase	2.2.1.2	tal	TIGR00874
transketolase	2.2.1.1	tkt	TIGR00232
conserved hypothetical protein			UniRef100_P76559
GDP-mannose pyrophosphatase nudK	3.6.1.-	nudK	UniRef100_B1XAD8
glutamate synthase, small subunit domain protein			TIGR01318
HAMP domain protein			PF00672.20
RND transporter, hydrophobe/amphiphile efflux-1 family protein			TIGR00915
protein YffB		yffB	UniRef100_P24178
succinyl-diaminopimelate desuccinylase	3.5.1.18	dapE	TIGR01246
conserved hypothetical protein			PF13980.1
dienelactone hydrolase family protein			PF01738.13
tRNA(Met) cytidine acetyltransferase TmcA	2.3.1.193	tmcA	UniRef100_P76562
neutral zinc metallopeptidase family protein			PF04228.8
phosphoribosylaminoimidazolesuccinocarboxamide synthase	6.3.2.6	purC	TIGR00081
lipoprotein 34		nlpB	UniRef100_P0A903
			
dihydrodipicolinate synthase	4.2.1.52	dapA	TIGR00674
glycine cleavage system transcriptional repressor		gcvR	UniRef100_P0A9I3
putative peroxiredoxin bcp			UniRef100_P0AE54
hydrogenase-4 component A	1.-.-.-	hyfA	UniRef100_P23481
hydrogenase-4 component B	1.-.-.-	hyfB	UniRef100_P23482
hydrogenase-4 component C	1.-.-.-	hyfC	UniRef100_P77858
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein			PF00361.15
hydrogenase-4 component E	1.-.-.-	hyfE	UniRef100_P0AEW2
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein			PF00361.15
hydrogenase-4 component G	1.-.-.-	hyfG	UniRef100_P77329
4Fe-4S binding domain protein			PF00037.22
formate hydrogenlyase subunit 7		hycG	UniRef100_P16433
formate hydrogenlyase maturation HycH family protein			PF07450.6
AAA domain family protein			PF07728.9
putative formate transporter 1			UniRef100_P0AC25
conserved hypothetical protein			PF01594.11
peptidase M48 family protein			PF01435.13
arsenate reductase	1.20.4.1	arsC	TIGR00014
dnaA regulatory inactivator Hda		hda	TIGR03420
uracil permease		uraA	UniRef100_P0AGM8
uracil phosphoribosyltransferase	2.4.2.9	upp	TIGR01091
phosphoribosylformylglycinamidine cyclo-ligase	6.3.3.1	purM	UniRef100_C4ZX74
phosphoribosylglycinamide formyltransferase	2.1.2.2	purN	TIGR00639
polyphosphate kinase 1	2.7.4.1	ppk1	TIGR03705
exopolyphosphatase	3.6.1.11	ppx	UniRef100_P0AFL8
cyclic di-GMP phosphodiesterase YfgF	3.1.4.52	yfgF	UniRef100_P77172
conserved hypothetical protein			UniRef100_E2QPW7
conserved hypothetical protein			PF11119.3
glycine zipper family protein			PF13488.1
conserved hypothetical protein			UniRef100_P76573
GMP synthase [glutamine-hydrolyzing]	6.3.5.2	guaA	UniRef100_C4ZX82
inosine-5'-monophosphate dehydrogenase	1.1.1.205	guaB	TIGR01302
conserved hypothetical protein			UniRef100_P76575
exodeoxyribonuclease VII, large subunit	3.1.11.6	xseA	TIGR00237
ribosome-associated GTPase EngA		engA	TIGR03594
outer membrane assembly lipoprotein YfgL		yfgL	TIGR03300
conserved hypothetical protein			PF09976.4
histidine--tRNA ligase	6.1.1.21	hisS	TIGR00442
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	1.17.7.1	ispG	TIGR00612
cytoskeleton protein rodZ		rodZ	UniRef100_C4ZX91
23S rRNA m2A2503 methyltransferase	2.1.1.-	rlmN	TIGR00048
nucleoside diphosphate kinase	2.7.4.6	ndk	UniRef100_A7ZPW1
penicillin-binding protein 1C		pbpC	TIGR02073
alpha-2-macroglobulin MG1 domain protein			PF11974.3
3-mercaptopyruvate sulfurtransferase	2.8.1.2	sseA	UniRef100_P31142
			
sseB family protein			PF07179.7
			
peptidase B	3.4.11.23	pepB	UniRef100_C4ZX98
feS assembly protein IscX		iscX	TIGR03412
ferredoxin, 2Fe-2S type, ISC system		fdx	TIGR02007
fe-S protein assembly chaperone HscA		hscA	TIGR01991
fe-S protein assembly co-chaperone HscB		hscB	TIGR00714
iron-sulfur cluster assembly protein IscA		iscA	TIGR02011
nifU-like protein		nifU	UniRef100_P0ACD6
cysteine desulfurase IscS	2.8.1.7	iscS	TIGR02006
iron-sulfur cluster assembly transcription factor IscR		iscR	TIGR02010
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ	2.1.1.200	trmJ	UniRef100_A1AE69
inositol-1-monophosphatase	3.1.3.25	suhB	UniRef100_P0ADG6
prolyl oligopeptidase family protein			PF00326.16
MFS transporter, phenyl propionate permease family protein			TIGR00902
PRD domain protein			PF00874.15
hca operon transcriptional activator		hcaR	UniRef100_Q47141
biphenyl 2,3-dioxygenase alpha subunit	1.14.12.18	bphA1	UniRef100_Q53122
ring hydroxylating beta subunit			PF00866.13
biphenyl dioxygenase ferredoxin subunit		bphA3	UniRef100_Q52440
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase	1.3.1.n1	hcaB	UniRef100_P0CI32
pyridine nucleotide-disulfide oxidoreductase family protein			PF07992.9
inner membrane protein yphA		yphA	UniRef100_P0AD47
aldose 1-epimerase		yphB	UniRef100_P76584
zinc-binding dehydrogenase family protein			PF00107.21
branched-chain amino acid transport system / permease component family protein			PF02653.11
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
ABC transporter periplasmic-binding protein yphF		yphF	UniRef100_P77269
tetratricopeptide repeat family protein			PF13181.1
ROK family protein			PF00480.15
serine hydroxymethyltransferase	2.1.2.1	glyA	UniRef100_A7ZPZ4
oxidoreductase NAD-binding domain protein			PF00175.16
nitrogen regulatory protein P-II 1		glnB	UniRef100_P0A9Z3
AAA domain family protein			PF07728.9
yfhG lipofamily protein			PF13942.1
putative sensor-like histidine kinase yfhK			UniRef100_P52101
			
phosphoribosylformylglycinamidine synthase	6.3.5.3	purL	TIGR01735
tRNA-specific adenosine deaminase	3.5.4.-	tadA	UniRef100_P68398
lysozyme-like family protein			PF13702.1
haloacid dehalogenase-like hydrolase family protein			PF12710.2
helix-turn-helix domain, rpiR family protein			PF01418.12
conserved hypothetical protein			UniRef100_P52102
holo-[acyl-carrier-protein] synthase	2.7.8.7	acpS	UniRef100_C4ZYI6
pyridoxine 5'-phosphate synthase	2.6.99.2	pdxJ	TIGR00559
DNA repair protein RecO		recO	TIGR00613
GTP-binding protein Era		era	TIGR00436
ribonuclease III	3.1.26.3	rnc	TIGR02191
			
signal peptidase I	3.4.21.89	lepB	TIGR02227
GTP-binding protein LepA	3.6.5.-	lepA	TIGR01393
sigma-E factor regulatory protein rseC		rseC	UniRef100_P46187
sigma-E factor regulatory protein rseB		rseB	UniRef100_P0AFY0
sigma-E factor negative regulatory protein		rseA	UniRef100_P0AFX8
RNA polymerase sigma factor RpoE		rpoE	TIGR02939
ribosomal L11 methyltransferase family protein			PF06325.8
L-aspartate oxidase	1.4.3.16	nadB	TIGR00551
ATP-dependent RNA helicase SrmB	3.6.4.13	srmB	UniRef100_P21507
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
cysteine/O-acetylserine efflux protein		eamB	UniRef100_A8A390
autonomous glycyl radical cofactor		grcA	UniRef100_A7ZQ24
uracil-DNA glycosylase	3.2.2.27	ung	TIGR00628
RNA 2'-O ribose methyltransferase substrate binding family protein			PF08032.7
thioredoxin		trxA	TIGR01068
DTW domain protein			PF03942.10
acetyltransferase family protein			PF00583.19
CDP-diacylglycerol--serine O-phosphatidyltransferase	2.7.8.8	pssA	UniRef100_P23830
alpha-ketoglutarate permease		kgtP	UniRef100_P0AEX3
conserved hypothetical protein			PF10043.4
			
			
			
			
ATP-dependent chaperone protein ClpB		clpB	TIGR03346
conserved hypothetical protein			UniRef100_P33644
ribosomal large subunit pseudouridine synthase D	5.4.99.23	rluD	UniRef100_P33643
conserved hypothetical protein			UniRef100_P0AC04
ribosome-associated inhibitor A		raiA	UniRef100_P0AD51
P-protein	4.2.1.51	pheA	UniRef100_P0A9J9
T-protein	1.3.1.12	tyrA	UniRef100_P07023
3-deoxy-7-phosphoheptulonate synthase	2.5.1.54		TIGR00034
conserved hypothetical protein			PF10973.3
conserved hypothetical protein			PF13689.1
putative diguanylate cyclase YfiN			UniRef100_P46139
ompA family protein			PF00691.15
ribosomal protein L19		rplS	TIGR01024
tRNA (guanine(37)-N(1))-methyltransferase		trmD	TIGR00088
16S rRNA processing protein RimM		rimM	TIGR02273
ribosomal protein S16		rpsP	TIGR00002
signal recognition particle protein		ffh	TIGR00959
inner membrane protein ypjD		ypjD	UniRef100_P64434
conserved hypothetical protein			UniRef100_P37908
protein grpE		grpE	UniRef100_C4ZYN1
ATP-NAD kinase family protein			PF01513.16
DNA repair protein RecN		recN	TIGR00634
small protein A		smpA	UniRef100_P0A938
rnfH Ubiquitin family protein			PF03658.9
ribosome association toxin RatA		ratA	UniRef100_P0AGL5
ssrA-binding protein		smpB	TIGR00086
			
prophage CP4-57 integrase		intA	UniRef100_P32053
conserved hypothetical protein			UniRef100_P52123
			
conserved hypothetical protein			PF13148.1
			
DEAD/DEAH box helicase family protein			PF00270.24
conserved hypothetical protein			PF14130.1
conserved hypothetical protein			UniRef100_P52129
putative cP4-57 prophage; antitoxin of the RnlA-RnlB toxin-antitoxin system			UniRef100_P52130
50S ribosome-binding GTPase family protein			PF01926.18
conserved hypothetical protein			PF06067.6
deoR-like helix-turn-helix domain protein			PF08220.7
putative membrane protein			TMHMM
conserved hypothetical protein			UniRef100_P77365
conserved hypothetical protein			UniRef100_P52135
arsC family protein			PF03960.10
arsenical pump membrane family protein			PF02040.10
arsenical pump membrane family protein			PF02040.10
putative membrane protein			TMHMM
intergenic-region protein			UniRef100_Q8VRA1
conserved hypothetical protein			UniRef100_Q47685
			
putative antitoxin YfjZ			UniRef100_P52141
putative toxin YpjF			UniRef100_Q46953
outer membrane autotransporter barrel domain protein			TIGR01414
conserved hypothetical protein			UniRef100_P76612
conserved hypothetical protein			UniRef100_P76613
			
alpha amylase, catalytic domain protein			PF00128.19
putative alpha amylase			UniRef100_E9WUX3
alpha amylase family domain protein			UniRef100_E7J7J4
protein CsiD		csiD	UniRef100_C4ZYR1
L-2-hydroxyglutarate oxidase LhgO	1.1.3.15	lhgO	UniRef100_P37339
succinate-semialdehyde dehydrogenase [NADP+] GabD	1.2.1.79	gabD	UniRef100_P25526
4-aminobutyrate transaminase	2.6.1.19	gabT	TIGR00700
GABA permease		gabP	TIGR01773
HTH-type transcriptional repressor CsiR		csiR	UniRef100_P37338
conserved hypothetical protein			UniRef100_P0ADE7
proteolipid membrane potential modulator family protein			PF01679.12
putative HTH-type transcriptional regulator ygaV			UniRef100_P77295
inner membrane protein ygaP		ygaP	UniRef100_P55734
DNA-binding protein stpA		stpA	UniRef100_P0ACG2
conserved hypothetical protein			PF06610.8
conserved hypothetical protein			PF09400.5
conserved hypothetical protein			PF05957.8
glutaredoxin-like protein nrdH		nrdH	UniRef100_P0AC67
nrdI protein		nrdI	TIGR00333
ribonucleoside-diphosphate reductase, alpha subunit	1.17.4.1		TIGR02506
ribonucleoside-diphosphate reductase 2 subunit beta	1.17.4.1	nrdF	UniRef100_P37146
glycine betaine/L-proline transport ATP binding subunit		proV	TIGR01186
binding--dependent transport system inner membrane component family protein			PF00528.17
glycine betaine-binding periplasmic protein		proX	UniRef100_P0AFM3
conserved hypothetical protein			UniRef100_E5B7Z3
major Facilitator Superfamily protein			PF07690.11
inner membrane protein YgaZ		ygaZ	UniRef100_P76630
branched-chain amino acid transport family protein			PF05437.7
marR family protein			PF01047.17
conserved hypothetical protein			UniRef100_E2WXS3
efflux pump membrane family protein			TIGR00998
multidrug resistance protein B		emrB	UniRef100_P0AEJ1
S-ribosylhomocysteine lyase	4.4.1.21	luxS	UniRef100_A7ZQC0
glutamate--cysteine ligase	6.3.2.2	gshA	TIGR01434
inner membrane protein yqaA		yqaA	UniRef100_P0ADR0
phosphatase YqaB	3.1.3.-	yqaB	UniRef100_P77475
carbon storage regulator		csrA	TIGR00202
alanine--tRNA ligase	6.1.1.7	alaS	TIGR00344
regulatory protein recX		recX	UniRef100_A7ZQC7
protein RecA		recA	TIGR02012
protein YgaD		ygaD	UniRef100_P0A6G4
lytic murein transglycosylase B	2.4.-.-	mltB	TIGR02282
glucitol/sorbitol permease IIC component		srlA	UniRef100_P56579
glucitol/sorbitol-specific phosphotransferase enzyme IIB component	2.7.1.69	srlE	UniRef100_P56580
PTS system, glucitol/sorbitol-specific IIA component family protein	2.7.1.69		TIGR00849
sorbitol-6-phosphate 2-dehydrogenase	1.1.1.140	srlD	UniRef100_P05707
glucitol operon activator family protein			PF06923.6
deoR C terminal sensor domain protein			PF00455.17
AAA domain family protein			PF07728.9
arabinose 5-phosphate isomerase GutQ	5.3.1.13	gutQ	UniRef100_Q8X4S5
anaerobic nitric oxide reductase flavorubredoxin		norV	UniRef100_B1XCN7
nitric oxide reductase FlRd-NAD(+) reductase	1.18.1.-	norW	UniRef100_C4ZYV6
carbamoyltransferase HypF		hypF	TIGR00143
electron transport protein hydN		hydN	UniRef100_P0AAK6
putative predicted protein			UniRef100_D6IU51
periplasmic binding s and sugar binding domain of LacI family protein			PF00532.16
PTS system, maltose and glucose-specific subfamily, IIC component domain protein			TIGR00852
glycosyl hydrolase 1 family protein			PF00232.13
hydrogenase maturation peptidase HycI	3.4.23.-	hycI	TIGR00142
formate hydrogenlyase maturation HycH family protein			PF07450.6
formate hydrogenlyase subunit 7		hycG	UniRef100_P16433
4Fe-4S binding domain protein			PF00037.22
respiratory-chain NADH dehydrogenase, 30 Kd subunit			PF00329.14
hydrogenase-4 component C	1.-.-.-	hyfC	UniRef100_P77858
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein			PF00361.15
hydrogenase-4 component A	1.-.-.-	hyfA	UniRef100_P23481
formate hydrogenlyase regulatory protein hycA		hycA	UniRef100_P0AEV5
hydrogenase nickel insertion protein HypA		hypA	TIGR00100
hydrogenase accessory protein HypB		hypB	TIGR00073
hydrogenase assembly chaperone HypC/HupF		hypC	TIGR00074
hydrogenase expression/formation protein HypD		hypD	TIGR00075
hydrogenase expression/formation protein HypE		hypE	TIGR02124
formate hydrogenlyase transcriptional activator		fhlA	UniRef100_P19323
nitrous oxide-stimulated promoter family protein			PF11756.3
DNA mismatch repair protein MutS		mutS	TIGR01070
serine/threonine-protein phosphatase 2	3.1.3.16	pphB	UniRef100_P55799
deoR C terminal sensor domain protein			PF00455.17
NAD binding domain of 6-phosphogluconate dehydrogenase family protein			PF03446.10
conserved hypothetical protein			PF07005.6
class II Aldolase and Adducin N-terminal domain protein			PF00596.16
xylose isomerase-like TIM barrel family protein			PF01261.19
inner membrane permease ygbN		ygbN	UniRef100_Q46892
RNA polymerase sigma factor RpoS		rpoS	TIGR02394
murein hydrolase activator NlpD		nlpD	UniRef100_P0ADA3
protein-L-isoaspartate O-methyltransferase	2.1.1.77	pcm	TIGR00080
5'/3'-nucleotidase SurE	3.1.3.5	surE	TIGR00087
tRNA pseudouridine synthase D	5.4.99.27	truD	UniRef100_A7ZQI9
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	ispF	UniRef100_A7ZQJ0
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2.7.7.60	ispD	UniRef100_A7ZQJ1
cell division protein ftsB		ftsB	UniRef100_A7ZQJ2
inner membrane protein ygbE		ygbE	UniRef100_P46141
adenylyl-sulfate kinase	2.7.1.25	cysC	UniRef100_A7ZQJ4
sulfate adenylyltransferase subunit 1	2.7.7.4	cysN	UniRef100_B7NT95
sulfate adenylyltransferase, small subunit	2.7.7.4	cysD	TIGR02039
M42 glutamyl aminopeptidase family protein			PF05343.9
conserved hypothetical protein			UniRef100_E7J7X4
CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI		cas2	TIGR01873
CRISPR-associated endonuclease Cas1	3.1.-.-	cas1	TIGR00287
CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI		cas6e	TIGR01907
			
CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI		cas7	TIGR01869
CRISPR type I-E/ECOLI-associated protein CasB/Cse2		casB	TIGR02548
CRISPR type I-E/ECOLI-associated protein CasA/Cse1		casA	TIGR02547
CRISPR-associated endonuclease Cas3-HD	3.1.-.-		TIGR01596
			
phosphoadenosine phosphosulfate reductase	1.8.4.8	cysH	TIGR02057
sulfite reductase (NADPH) hemoprotein, beta-component	1.8.1.2	cysI	TIGR02041
sulfite reductase [NADPH] flavoprotein, alpha-component	1.8.1.2		TIGR01931
queuosine biosynthesis protein QueD		queD	TIGR03367
FAD binding domain protein			PF01494.14
conserved hypothetical protein			UniRef100_D6IUA5
conserved hypothetical protein			UniRef100_Q46906
electron transfer flavodomain protein			PF01012.16
electron transfer flavodomain protein			PF01012.16
inner membrane metabolite transport protein ygcS		ygcS	UniRef100_Q46909
FAD linked oxidase, C-terminal domain protein			PF02913.14
short chain dehydrogenase family protein			PF00106.20
inner membrane protein yqcE		yqcE	UniRef100_P77031
carbohydrate kinase, FGGY family			PF02782.11
conserved hypothetical protein			UniRef100_E9A6A3
conserved hypothetical protein			UniRef100_P64555
repair family protein			PF04536.9
phosphopyruvate hydratase	4.2.1.11	eno	TIGR01060
CTP synthase	6.3.4.2	pyrG	TIGR00337
nucleoside triphosphate pyrophosphohydrolase	3.6.1.8	mazG	UniRef100_P0AEY4
mRNA interferase MazF	3.1.-.-	mazF	UniRef100_P0AE71
antitoxin MazE		mazE	UniRef100_P0AE73
GTP pyrophosphokinase	2.7.6.5	relA	UniRef100_P0AG22
23S rRNA (uracil-5-)-methyltransferase RumA	2.1.1.-	rumA	TIGR00479
signal transduction histidine-protein kinase BarA	2.7.13.3	barA	UniRef100_P0AEC7
glucarate dehydratase	4.2.1.40	gudD	TIGR03247
mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein			PF01188.16
putative glucarate transporter			UniRef100_Q46916
flavodoxin family protein			PF00258.20
RNA pseudouridylate synthase family protein			PF00849.17
conserved hypothetical protein			UniRef100_Q46919
			
protein syd		syd	UniRef100_A7ZQN6
queuine synthase	1.7.1.13	queF	TIGR03138
putative lysine decarboxylase family protein			PF03641.9
serine transporter		sdaC	UniRef100_P0AAD7
L-serine ammonia-lyase	4.3.1.17		TIGR00720
protein Xni		ygdG	UniRef100_A7ZQP2
lactaldehyde reductase	1.1.1.77	fucO	TIGR02638
L-fuculose phosphate aldolase	4.1.2.17	fucA	TIGR01086
H+ symporter permease		fucP	TIGR00885
L-fucose isomerase	5.3.1.25	fucI	TIGR01089
L-fuculokinase	2.7.1.51	fucK	TIGR02628
L-fucose mutarotase	5.1.3.n2	fucU	UniRef100_A7ZQP8
deoR C terminal sensor domain protein			PF00455.17
ribosomal RNA large subunit methyltransferase M	2.1.1.-	rlmM	UniRef100_A7ZQQ1
conserved hypothetical protein			UniRef100_P0ADR4
glycine cleavage system transcriptional activator		gcvA	UniRef100_P0A9F8
			
conserved hypothetical protein			UniRef100_P65296
cysteine desulfurase, catalytic subunit CsdA	2.8.1.7	csdA	TIGR03392
cysteine desulfurase, sulfur acceptor subunit CsdE	2.8.1.7	csdE	TIGR03391
thiF family protein			PF00899.16
membrane-bound lytic murein transglycosylase A	4.2.2.n1	mltA	UniRef100_P0A936
N-acetylmuramoyl-L-alanine amidase AmiC	3.5.1.28	amiC	UniRef100_P63884
amino-acid N-acetyltransferase	2.3.1.1	argA	TIGR01890
exodeoxyribonuclease V, alpha subunit	3.1.11.5	recD	TIGR01447
exodeoxyribonuclease V, beta subunit	3.1.11.5	recB	TIGR00609
protease 3	3.4.24.55	ptrA	UniRef100_P05458
exodeoxyribonuclease V, gamma subunit	3.1.11.5	recC	TIGR01450
prepilin-type N-terminal cleavage/methylation domain protein			TIGR02532
conserved hypothetical protein			PF10713.4
prepilin-type N-terminal cleavage/methylation domain protein			TIGR02532
prepilin-type N-terminal cleavage/methylation domain protein			TIGR02532
conserved hypothetical protein			UniRef100_Q0TE06
thymidylate synthase	2.1.1.45	thyA	TIGR03284
prolipoprotein diacylglyceryl transferase	2.4.99.-	lgt	TIGR00544
phosphoenolpyruvate-protein phosphotransferase	2.7.3.9	ptsP	TIGR01417
RNA pyrophosphohydrolase	3.6.1.-	rppH	UniRef100_A7ZQT6
conserved hypothetical protein			UniRef100_E7U871
DNA mismatch repair endonuclease MutH		mutH	TIGR02248
conserved hypothetical protein			UniRef100_P67129
conserved hypothetical protein			UniRef100_P65296
protein tas		tas	UniRef100_P0A9T4
lysophospholipid transporter lplT		lplT	UniRef100_B7LF12
bifunctional protein aas	6.2.1.20	aas	UniRef100_C4ZZY9
bacterial regulatory s, lacI family protein			PF00356.16
diaminopimelate decarboxylase	4.1.1.20	lysA	TIGR01048
conserved hypothetical protein			UniRef100_P03813
transcriptional activator protein lysR		lysR	UniRef100_P03030
galactose-proton symporter		galP	UniRef100_P0AEP2
2-deoxy-D-gluconate 3-dehydrogenase	1.1.1.125	kduD	TIGR01832
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	5.3.1.17	kduI	UniRef100_C5A0C6
acetyl-CoA C-acetyltransferase family protein			TIGR01930
inner membrane transport protein YqeG		yqeG	UniRef100_P63342
bacterial regulatory s, luxR family protein			PF00196.14
transcriptional regulatory , C terminal family protein			PF00486.23
putative predicted protein			UniRef100_Q46943
			
			
tetratricopeptide repeat family protein			PF07720.7
conserved hypothetical protein			UniRef100_P76639
conserved hypothetical protein			UniRef100_Q46789
conserved hypothetical protein			UniRef100_A7ZQW0
transglycosylase SLT domain protein			PF01464.15
			
response regulator			UniRef100_E0IWG3
conserved hypothetical protein			UniRef100_E9YTT6
conserved hypothetical protein			UniRef100_E2WZ06
integrase core domain protein			PF00665.21
transposase family protein			PF01527.15
putative lipoprotein			UniRef100_Q46797
lysM domain protein			PF01476.15
molybdopterin-binding domain of aldehyde dehydrogenase family protein			PF02738.13
FAD binding domain in molybdopterin dehydrogenase family protein			PF00941.16
2Fe-2S iron-sulfur cluster binding domain protein			PF00111.22
bacterial regulatory , Fis family protein			PF02954.14
conserved hypothetical protein			UniRef100_Q8FE91
diaminopropionate ammonia-lyase	4.3.1.15	dpaL	TIGR03528
peptidase M20/M25/M40 family protein			PF01546.23
dihydropyrimidinase	3.5.2.2	hydA	TIGR02033
carbamate kinase	2.7.2.2	arcC	TIGR00746
conserved hypothetical protein			UniRef100_Q46808
putative selenium-dependent hydroxylase accessory protein YqeC			TIGR03172
molybdenum hydroxylase accessory protein, YgfJ family		ygfJ	TIGR03310
putative selenate reductase, YgfK subunit			TIGR03315
protein SsnA		ssnA	UniRef100_Q46812
FAD binding domain in molybdopterin dehydrogenase family protein			PF00941.16
molybdopterin-binding domain of aldehyde dehydrogenase family protein			PF02738.13
uracil-xanthine permease family protein			TIGR00801
guanine deaminase	3.5.4.3	guaD	TIGR02967
putative permease yjcD			UniRef100_P0AF53
4Fe-4S binding domain protein			PF00037.22
glutamate synthase, small subunit domain protein			TIGR01318
putative purine permease ygfU			UniRef100_Q46821
isopentenyl-diphosphate delta-isomerase	5.3.3.2	idi	TIGR02150
lysine--tRNA ligase	6.1.1.6	lysS	TIGR00499
peptide chain release factor 2		prfB	TIGR00020
conserved hypothetical protein			UniRef100_B3WX84
single-stranded-DNA-specific exonuclease RecJ	3.1.-.-	recJ	TIGR00644
DSBA-like thioredoxin domain protein			PF01323.15
tyrosine recombinase XerD		xerD	TIGR02225
flavodoxin			TIGR01752
conserved hypothetical protein			PF07254.7
conserved hypothetical protein			UniRef100_P64561
tRNA-modifying protein ygfZ		ygfZ	UniRef100_A7ZR07
conserved hypothetical protein			UniRef100_P67155
conserved hypothetical protein			UniRef100_P44172
glycosyl hydrolase 1 family protein			PF00232.13
conserved hypothetical protein			UniRef100_P52037
glycine dehydrogenase	1.4.4.2	gcvP	TIGR00461
glycine cleavage system H protein		gcvH	TIGR00527
glycine cleavage system T protein	2.1.2.10	gcvT	TIGR00528
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein	1.14.13.-		TIGR01988
2-polyprenyl-6-methoxyphenol 4-hydroxylase	1.14.13.-	ubiH	TIGR01984
xaa-Pro aminopeptidase	3.4.11.9	pepP	UniRef100_P15034
conserved hypothetical protein			UniRef100_P44882
cell division ZapA family protein			PF05164.8
			
5-formyltetrahydrofolate cyclo-ligase	6.3.3.2		TIGR02727
			
D-3-phosphoglycerate dehydrogenase	1.1.1.95	serA	UniRef100_P0A9T2
ribose 5-phosphate isomerase A	5.3.1.6	rpiA	TIGR00021
lysR substrate binding domain protein			PF03466.15
chromosome initiation inhibitor		iciA	UniRef100_A7ZR24
methylmalonyl-CoA mutase N-terminal domain protein	5.4.99.-		TIGR00641
LAO/AO transport system ATPase	2.7.-.-		TIGR00750
enoyl-CoA hydratase/isomerase family protein			PF00378.15
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
acetyl-CoA hydrolase/transferase family protein			UniRef100_Q7MVN7
conserved hypothetical protein			PF04402.9
arginine exporter protein ArgO		argO	UniRef100_P11667
small-conductance mechanosensitive channel		mscS	UniRef100_P0C0S2
fructose-bisphosphate aldolase, class II	4.1.2.13	fbaA	TIGR01520
phosphoglycerate kinase	2.7.2.3	pgk	UniRef100_A7ZR34
erythrose-4-phosphate dehydrogenase	1.2.1.72	epd	TIGR01532
conserved hypothetical protein			UniRef100_P11664
putative transcriptional regulator			UniRef100_E3Y5X4
fructose-1,6-bisphosphatase, class II	3.1.3.11	glpX	TIGR00330
zinc-binding dehydrogenase family protein			PF00107.21
PTS system mannitol-specific cryptic EIICB component	2.7.1.69	cmtA	UniRef100_P69827
mannitol-specific cryptic phosphotransferase enzyme IIA component	2.7.1.-	cmtB	UniRef100_P69825
transketolase	2.2.1.1	tkt	TIGR00232
conserved hypothetical protein			UniRef100_P25894
agmatinase	3.5.3.11	speB	TIGR01230
arginine decarboxylase	4.1.1.19	speA	TIGR01273
			
methionine adenosyltransferase	2.5.1.6	metK	TIGR01034
galactose-proton symporter		galP	UniRef100_P0AEP2
sprT-like family protein			PF10263.4
endonuclease-1	3.1.21.1	endA	UniRef100_P25736
ribosomal RNA small subunit methyltransferase E	2.1.1.193	rsmE	UniRef100_P0AGL8
glutathione synthase	6.3.2.3	gshB	TIGR01380
conserved hypothetical protein			UniRef100_A7ZR71
putative Holliday junction resolvase			UniRef100_B7MMD7
conserved hypothetical protein			UniRef100_P52052
conserved hypothetical protein			UniRef100_P67082
YGGT family protein			PF02325.12
conserved hypothetical protein			PF02594.11
non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	3.6.1.-	rdgB	TIGR00042
radical SAM superfamily protein			PF04055.16
conserved hypothetical protein			UniRef100_P46142
L-asparaginase 2	3.5.1.1	ansB	UniRef100_P00805
conserved hypothetical protein			PF11101.3
conserved hypothetical protein			UniRef100_P44649
tRNA (guanine-N(7)-)-methyltransferase	2.1.1.33	trmB	TIGR00091
A/G-specific adenine glycosylase	3.2.2.-	mutY	TIGR01084
putative Fe(2+)-trafficking protein			UniRef100_A7ZR88
conserved hypothetical protein			PF11873.3
nucleoside permease nupG		nupG	UniRef100_P0AFF4
ornithine decarboxylase, constitutive	4.1.1.17	speC	UniRef100_P21169
conserved hypothetical protein			PF04474.7
type II secretion system (T2SS), M family protein			PF04612.7
type II secretion system protein L		gspL	TIGR01709
type II secretion system protein C		gspC	TIGR01713
putative lipoprotein			UniRef100_D6JFA6
leader peptidase pppA		pppA	UniRef100_Q46836
conserved hypothetical protein			PF13322.1
conserved hypothetical protein			UniRef100_A7ZRK1
glycolate permease glcA		glcA	UniRef100_Q46839
			
malate synthase G	2.3.3.9	glcB	TIGR01345
conserved hypothetical protein			PF03928.9
4Fe-4S binding domain protein			PF00037.22
FAD binding domain protein			PF01565.18
glycolate oxidase, subunit GlcD		glcD	TIGR00387
bacterial regulatory s, gntR family protein			PF00392.16
putative dNA-binding transcriptional regulator domain protein			UniRef100_E7JMP4
transposase DDE domain protein			PF01609.16
inner membrane protein yghQ		yghQ	UniRef100_Q46841
thymidylate kinase family protein			PF02223.12
molybdopterin guanine dinucleotide synthesis B family protein			PF03205.9
conserved hypothetical protein			UniRef100_Q46844
low-affinity inorganic phosphate transporter 1		pitA	UniRef100_P0AFJ9
bifunctional glutathionylspermidine synthetase/amidase	3.5.1.78	gsp	UniRef100_P0AES0
glutathione S-transferase, C-terminal domain protein			PF00043.20
hydrogenase assembly chaperone HypC/HupF		hypC	TIGR00074
hydrogenase nickel insertion protein HypA		hypA	TIGR00100
hydrogenase-2 operon protein hybE		hybE	UniRef100_P0AAN2
hydrogenase expression/formation protein	3.4.23.-	hybD	TIGR00140
hydrogenase-2 large chain	1.12.99.6	hybC	UniRef100_P0ACE1
polysulphide reductase, NrfD family protein			PF03916.9
tat (twin-arginine translocation) pathway signal sequence domain protein			TIGR01409
hydrogenase-2 small chain	1.12.99.6	hybO	UniRef100_P69743
conserved hypothetical protein			PF11115.3
prolyl oligopeptidase family protein			PF00326.16
dienelactone hydrolase family protein			PF01738.13
aldo/keto reductase family protein			PF00248.16
conserved hypothetical protein			PF03350.11
conserved hypothetical protein			UniRef100_P0AG85
tonB system transport protein ExbD		exbD	TIGR02803
tonB-system energizer ExbB		exbB	TIGR02797
cystathionine beta-lyase	4.4.1.8	metC	TIGR01324
inner membrane protein YghB		yghB	UniRef100_P0AA62
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
alcohol dehydrogenase YqhD	1.1.1.-	yqhD	UniRef100_Q46856
2,5-diketo-D-gluconic acid reductase A	1.1.1.274	dkgA	UniRef100_Q46857
conserved hypothetical protein			PF12883.2
major outer membrane lipoprotein Lpp		lpp	UniRef100_P69778
radical SAM superfamily protein			PF04055.16
protein SufI		sufI	UniRef100_P26648
1-acyl-sn-glycerol-3-phosphate acyltransferase		plsC	UniRef100_P26647
DNA topoisomerase IV, A subunit	5.99.1.-	parC	TIGR01062
putative binding protein ygiS			UniRef100_Q46863
antitoxin MqsA		mqsA	UniRef100_Q46864
			
gyrI-like small molecule binding domain protein			PF06445.10
protein ygiW		ygiW	UniRef100_P0ADU6
response regulator			PF00072.19
sensor protein qseC	2.7.13.3	qseC	UniRef100_P40719
flavodoxin-like fold family protein			PF02525.12
putative quinol monooxygenase ygiN			UniRef100_P0ADU3
DNA topoisomerase IV, B subunit	5.99.1.-	parE	TIGR01055
conserved hypothetical protein			PF05728.7
calcineurin-like phosphoesterase family protein			PF00149.23
conserved hypothetical protein			PF06853.7
ADP-ribose pyrophosphatase	3.6.1.13	nudF	UniRef100_P83843
outer membrane protein tolC		tolC	UniRef100_P02930
conserved hypothetical protein			PF06693.6
glutathionylspermidine synthase preATP-grasp family protein			PF03738.9
conserved hypothetical protein			UniRef100_P24197
zinc transporter ZupT		zupT	UniRef100_A7ZRS2
conserved hypothetical protein			PF13260.1
3,4-dihydroxy-2-butanone 4-phosphate synthase	4.1.99.12	ribB	UniRef100_A7ZRS4
conserved hypothetical protein			UniRef100_Q46868
fimbrial family protein			PF00419.15
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
type VII secretion system (T7SS), usher family protein			PF00577.15
gram-negative pili assembly chaperone, C-terminal domain protein			PF02753.12
fimbrial family protein			PF00419.15
glycogen synthesis protein glgS		glgS	UniRef100_A7ZRT0
inner membrane protein yqiJ		yqiJ	UniRef100_P76657
inner membrane protein yqiK		yqiK	UniRef100_P77306
bifunctional protein RfaE, domain I	2.7.1.-	rfaE	TIGR02198
glnD PII-uridylyltransferase family protein			PF08335.6
CYTH domain protein			PF01928.16
			
bacterial SH3 domain protein			PF08239.6
multifunctional CCA protein	3.1.3.-	cca	UniRef100_C4ZQX3
undecaprenyl-diphosphatase UppP	3.6.1.27	uppP	TIGR00753
dihydroneopterin aldolase	4.1.2.25	folB	TIGR00525
acyl-phosphate glycerol 3-phosphate acyltransferase	2.3.1.-	plsY	TIGR00023
HTH-type transcriptional regulator DmlR		dmlR	UniRef100_P76250
L(+)-tartrate dehydratase subunit alpha	4.2.1.32	ttdA	UniRef100_Q0TD45
L(+)-tartrate dehydratase subunit beta	4.2.1.32	ttdB	UniRef100_Q0TD44
L-tartrate/succinate antiporter		ttdT	UniRef100_P39414
putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp			UniRef100_C4ZQY1
ribosomal protein S21		rpsU	TIGR00030
DNA primase	2.7.7.-	dnaG	UniRef100_P0ABS6
RNA polymerase sigma factor rpoD		rpoD	UniRef100_P00579
G/U mismatch-specific DNA glycosylase	3.2.2.28	mug	UniRef100_B7MB04
siderophore-interacting FAD-binding domain protein			PF08021.6
transcriptional regulator PadR-like family protein			PF03551.9
aerotaxis receptor		aer	UniRef100_P50466
putrescine aminotransferase	2.6.1.82	ygjG	TIGR03372
putative tRNA binding domain protein			PF01588.15
periplasmic binding s and sugar binding domain of LacI family protein			PF00532.16
evolved beta-galactosidase subunit alpha	3.2.1.23	ebgA	UniRef100_P06864
conserved hypothetical protein			PF04074.7
inner membrane transporter ygjI		ygjI	UniRef100_P42590
conserved hypothetical protein			UniRef100_P42591
conserved hypothetical protein			UniRef100_P42592
2,4-dienoyl-CoA reductase [NADPH]	1.3.1.34	fadH	UniRef100_P42593
antitoxin HigA		higA	UniRef100_P67702
mRNA interferase HigB	3.1.-.-	higB	UniRef100_P64579
ribosomal RNA large subunit methyltransferase G	2.1.1.174	rlmG	UniRef100_B1XG88
conserved hypothetical protein			PF01863.12
conserved hypothetical protein			PF02698.12
oxidoreductase , NAD-binding Rossmann fold family protein			PF01408.17
integral membrane , TerC family protein			TIGR03718
sodium:dicarboxylate symporter family protein			PF00375.13
inner membrane protein ygjV		ygjV	UniRef100_P42603
altronate hydrolase		uxaA	UniRef100_E3Y4Z3
glucuronate isomerase family protein			PF02614.9
hexuronate transporter		exuT	UniRef100_P0AA79
bacterial regulatory s, gntR family protein			PF00392.16
inner membrane protein YqjA		yqjA	UniRef100_P0AA65
secD export N-terminal TM region family protein			PF13721.1
protein yqjC		yqjC	UniRef100_P42616
conserved hypothetical protein			PF05957.8
inner membrane protein yqjE		yqjE	UniRef100_P64586
yqjK-like family protein			PF13997.1
inner membrane protein yqjF		yqjF	UniRef100_P42619
glutathione S-transferase, C-terminal domain protein			PF00043.20
inner membrane protein yhaH		yhaH	UniRef100_P64591
inner membrane protein yhaI		yhaI	UniRef100_P64593
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
pirin-like protein yhaK		yhaK	UniRef100_P42624
conserved hypothetical protein			UniRef100_P42625
serine dehydratase alpha chain family protein			PF03313.10
inner membrane transport protein YhaO		yhaO	UniRef100_P42628
L-serine ammonia-lyase	4.3.1.17		TIGR00720
protein tdcF		tdcF	UniRef100_P0AGL3
formate acetyltransferase	2.3.1.54	pflB	TIGR01255
acetate kinase	2.7.2.1	ackA	TIGR00016
serine transporter		sdaC	UniRef100_P0AAD7
threonine ammonia-lyase	4.3.1.19	ilvA	TIGR01127
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			UniRef100_P11865
conserved hypothetical protein			UniRef100_P11864
			
			
glycerate kinase 2	2.7.1.31	garK	UniRef100_P23524
2-hydroxy-3-oxopropionate reductase	1.1.1.60		TIGR01505
2-dehydro-3-deoxyglucarate aldolase	4.1.2.20	garL	TIGR03239
putative galactarate transporter			UniRef100_P0AA81
galactarate dehydratase	4.2.1.42	garD	TIGR03248
antitoxin PrlF		sohA	UniRef100_P15373
toxin YhaV	3.1.-.-	yhaV	UniRef100_P64595
deoR-like helix-turn-helix domain protein			PF08220.7
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit	4.1.2.40		TIGR02810
PTS system, mannose/fructose/sorbose , IIB component family protein	2.7.1.69		TIGR00854
PTS system sorbose-specific iic component family protein			PF03609.9
amidohydrolase family protein			PF01979.15
putative tagatose-6-phosphate ketose/aldose isomerase			UniRef100_P42907
class II aldolase, tagatose bisphosphate family	4.1.2.-		TIGR01858
galactosamine-specific PTS system enzyme IIB component		agaB	UniRef100_C3ST27
PTS system, mannose/fructose/sorbose , IIC component family protein			TIGR00822
PTS system, mannose/fructose/sorbose , IID component family protein			TIGR00828
glucosamine-6-phosphate isomerases/6-phosphogluconolactonase family protein			PF01182.15
fimbrial family protein			PF00419.15
gram-negative pili assembly chaperone, C-terminal domain protein			PF02753.12
type VII secretion system (T7SS), usher family protein			PF00577.15
fimbrial family protein			PF00419.15
ribosomal RNA small subunit methyltransferase I	2.1.1.198	rsmI	UniRef100_P67088
penicillin-binding protein activator LpoA		lpoA	UniRef100_P45464
conserved hypothetical protein			PF02021.12
SIS domain protein			PF01380.17
BON domain protein			PF04972.12
putative permease family protein			PF03773.8
NAD dependent epimerase/dehydratase family protein			PF01370.16
putative uPF0306 protein yhbP			UniRef100_E7HQH0
general stress protein 18	3.2.-.-	yfkM	UniRef100_P80876
acetyltransferase family protein			PF00583.19
GIY-YIG catalytic domain protein			PF01541.19
conserved hypothetical protein			UniRef100_P64601
conserved hypothetical protein			UniRef100_P45527
peptidase U32 family protein			PF01136.14
luciferase oxidoreductase, group 1 family protein	1.-.-.-		TIGR03558
tryptophan-specific transport protein		mtr	UniRef100_P0AAD2
cold-shock DEAD box protein A	3.6.4.13	deaD	UniRef100_P0A9P7
lipoprotein nlpI		nlpI	UniRef100_P0AFB3
polyribonucleotide nucleotidyltransferase	2.7.7.8	pnp	TIGR03591
			
ribosomal protein S15		rpsO	TIGR00952
tRNA pseudouridine(55) synthase	5.4.99.25	truB	TIGR00431
ribosome-binding factor A		rbfA	TIGR00082
translation initiation factor IF-2		infB	TIGR00487
transcription elongation protein nusA		nusA	UniRef100_P0AFF8
ribosome maturation factor rimP		rimP	UniRef100_A7ZS68
argininosuccinate synthase	6.3.4.5	argG	TIGR00032
putative phosphoethanolamine transferase yhbX			UniRef100_P42640
preprotein translocase, SecG subunit		secG	TIGR00810
phosphoglucosamine mutase	5.4.2.10	glmM	TIGR01455
dihydropteroate synthase	2.5.1.15	folP	TIGR01496
ATP-dependent zinc metalloprotease FtsH	3.4.24.-	ftsH	UniRef100_P0AAI3
ribosomal RNA large subunit methyltransferase J	2.1.1.166	rrmJ	TIGR00438
RNA-binding protein YhbY		yhbY	UniRef100_P0AGK6
transcription elongation factor greA		greA	UniRef100_P0A6W7
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	3.4.16.4	dacB	TIGR00666
obg family GTPase CgtA		cgtA	TIGR02729
conserved hypothetical protein			UniRef100_P0AA74
ribosomal protein L27		rpmA	TIGR00062
ribosomal protein L21		rplU	TIGR00061
octaprenyl-diphosphate synthase	2.5.1.90	ispB	UniRef100_P0AD57
winged helix-turn-helix DNA-binding family protein			PF13693.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase	2.5.1.7	murA	TIGR01072
bolA-like family protein			PF01722.13
putative phospholipid ABC transporter-binding protein mlaB			UniRef100_P64602
putative phospholipid-binding protein mlaC			UniRef100_P0ADV7
putative phospholipid ABC transporter-binding protein mlaD			UniRef100_P64605
putative phospholipid ABC transporter permease protein mlaE			UniRef100_P64608
putative phospholipid import ATP-binding protein MlaF			UniRef100_P63388
inner membrane protein yrbG		yrbG	UniRef100_P45394
arabinose 5-phosphate isomerase KdsD	5.3.1.13	kdsD	UniRef100_P45395
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	3.1.3.45	kdsC	UniRef100_P0ABZ5
lipopolysaccharide export system protein lptC		lptC	UniRef100_P0ADW1
lipopolysaccharide transport periplasmic protein LptA		lptA	TIGR03002
lipopolysaccharide export system ATP-binding protein LptB	3.6.3.-	lptB	UniRef100_P0A9V3
RNA polymerase sigma-54 factor		rpoN	TIGR02395
ribosomal subunit interface protein		raiA	TIGR00741
PTS IIA-like nitrogen-regulatory protein PtsN		ptsN	TIGR01419
conserved hypothetical protein			UniRef100_A7ZSA4
phosphocarrier protein NPr	2.7.11.-	ptsO	UniRef100_P0A9N2
monofunctional biosynthetic peptidoglycan transglycosylase	2.4.2.-	mtgA	TIGR02070
phoP regulatory network YrbL family protein			PF10707.4
enhancing lycopene biosynthesis protein 2		elbB	UniRef100_P0ABU5
aerobic respiration control sensor protein ArcB	2.7.13.3	arcB	UniRef100_P0AEC3
radical SAM superfamily protein			PF04055.16
glutamate synthase [NADPH] large chain	1.4.1.13	gltB	UniRef100_P09831
glutamate synthase [NADPH] small chain	1.4.1.13	gltD	UniRef100_P09832
conserved hypothetical protein			PF06551.7
conserved hypothetical protein			UniRef100_P28722
type VII secretion system (T7SS), usher family protein			PF00577.15
secF domain protein			UniRef100_P45421
transposase DDE domain protein			PF01609.16
conserved hypothetical protein			UniRef100_C9QY28
fimbrial family protein			PF00419.15
conserved hypothetical protein			PF06250.6
conserved hypothetical protein			UniRef100_P45424
ROK family protein			PF00480.15
putative N-acetylmannosamine-6-phosphate 2-epimerase			UniRef100_B7MBY5
putative sialic acid transporter			UniRef100_C4ZSW2
N-acetylneuraminate lyase	4.1.3.3	nanA	TIGR00683
bacterial regulatory s, gntR family protein			PF00392.16
putative cryptic C4-dicarboxylate transporter DcuD			UniRef100_P45428
stringent starvation protein B		sspB	UniRef100_P0AFZ4
glutathione S-transferase, C-terminal domain protein			PF00043.20
30S ribosomal protein S9		rpsI	UniRef100_A8AQC0
ribosomal protein L13		rplM	TIGR01066
conserved hypothetical protein			UniRef100_P64613
putative cytochrome d ubiquinol oxidase subunit 3			UniRef100_P0ADW5
protease degQ	3.4.21.-	degQ	UniRef100_P39099
periplasmic serine peptidase DegS	3.4.21.-	degS	TIGR02038
malate dehydrogenase, NAD-dependent	1.1.1.37	mdh	TIGR01772
arginine repressor		argR	TIGR01529
conserved hypothetical protein			PF07338.8
conserved hypothetical protein			UniRef100_P64618
p-hydroxybenzoic acid efflux pump subunit AaeB		aaeB	UniRef100_P46481
efflux transporter, RND family, MFP subunit			TIGR01730
conserved hypothetical protein			PF07869.7
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
modulator of DNA gyrase family protein			PF01523.11
conserved hypothetical protein			PF13116.1
ribonuclease G	3.1.26.-	rng	UniRef100_P0A9J2
septum formation protein Maf		maf	TIGR00172
rod shape-determining protein MreD		mreD	TIGR03426
rod shape-determining protein MreC		mreC	TIGR00219
rod shape-determining protein mreB		mreB	UniRef100_P0A9X5
RNase E specificity factor CsrD		csrD	UniRef100_P13518
putative quinone oxidoreductase YhdH			UniRef100_P26646
conserved hypothetical protein			UniRef100_B7N0P0
acetyl-CoA carboxylase, biotin carboxyl carrier protein		accB	TIGR00531
acetyl-CoA carboxylase, biotin carboxylase subunit	6.3.4.14	accC	TIGR00514
conserved hypothetical protein			PF06196.7
sodium/pantothenate symporter		panF	TIGR02119
ribosomal protein L11 methyltransferase	2.1.1.-	prmA	TIGR00406
tRNA-dihydrouridine synthase B	1.-.-.-	dusB	UniRef100_P0ABT7
DNA-binding protein fis		fis	UniRef100_A8AQG0
DNA adenine methyltransferase YhdJ	2.1.1.72	yhdJ	UniRef100_P28638
conserved hypothetical protein			PF10831.3
putative acrEF/envCD operon repressor			UniRef100_P0ACT3
acriflavine resistance protein A		acrA	UniRef100_P0AE07
			
RND transporter, hydrophobe/amphiphile efflux-1 family protein			TIGR00915
conserved hypothetical protein			UniRef100_P64623
putative membrane protein			TMHMM
bacterial extracellular solute-binding s, 3 family protein			PF00497.15
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein			TIGR01726
inner membrane amino-acid ABC transporter permease protein yhdY		yhdY	UniRef100_P45768
conserved hypothetical protein			UniRef100_P45769
			
			
			
			
conserved hypothetical protein			PF07369.6
protein YrdA		yrdA	UniRef100_P0A9W9
shikimate dehydrogenase	1.1.1.25	aroE	UniRef100_C4ZUD6
tRNA threonylcarbamoyladenosine biosynthesis protein RimN		rimN	UniRef100_B1X6D5
			
			
conserved hypothetical protein			PF04361.8
DNA protecting protein DprA		dprA	TIGR00732
peptide deformylase	3.5.1.88	def	TIGR00079
methionyl-tRNA formyltransferase	2.1.2.9	fmt	TIGR00460
ribosomal RNA small subunit methyltransferase B	2.1.1.-	sun	TIGR00563
trk system potassium uptake protein trkA		trkA	UniRef100_P0AGJ0
			
large conductance mechanosensitive channel protein		mscL	TIGR00220
zn(II)-responsive transcriptional regulator		zntR	TIGR02043
conserved hypothetical protein			UniRef100_P36677
ribosomal protein L17		rplQ	TIGR00059
DNA-directed RNA polymerase, alpha subunit	2.7.7.6	rpoA	TIGR02027
ribosomal protein S4		rpsD	TIGR01017
30S ribosomal protein S11		rpsK	TIGR03632
30S ribosomal protein S13		rpsM	TIGR03631
preprotein translocase, SecY subunit		secY	TIGR00967
ribosomal protein L15		rplO	TIGR01071
ribosomal protein L30		rpmD	TIGR01308
ribosomal protein S5		rpsE	TIGR01021
ribosomal protein L18		rplR	TIGR00060
ribosomal protein L6		rplF	TIGR03654
30S ribosomal protein S8		rpsH	UniRef100_A8AQK2
ribosomal S14p/S29e family protein			PF00253.16
50S ribosomal protein L5		rplE	UniRef100_A7ZSJ7
ribosomal protein L24		rplX	TIGR01079
ribosomal protein L14		rplN	TIGR01067
30S ribosomal protein S17		rpsQ	TIGR03635
ribosomal protein L29		rpmC	TIGR00012
ribosomal protein L16		rplP	TIGR01164
ribosomal protein S3		rpsC	TIGR01009
ribosomal protein L22		rplV	TIGR01044
30S ribosomal protein S19		rpsS	UniRef100_A8AQL3
ribosomal protein L2		rplB	TIGR01171
50S ribosomal protein L23		rplW	UniRef100_A1JS44
50S ribosomal protein L4		rplD	TIGR03953
50S ribosomal protein L3		rplC	TIGR03625
ribosomal protein S10		rpsJ	TIGR01049
protein pioO		pioO	UniRef100_P03825
putative general secretion pathway protein A			UniRef100_P45756
type II secretion system protein C		gspC	TIGR01713
type II secretion system protein D		gspD	TIGR02517
type II secretion system protein E		gspE	TIGR02533
type II secretion system protein F		gspF	TIGR02120
type II secretion system protein G		gspG	TIGR01710
type II secretion system protein H		gspH	TIGR01708
type II secretion system protein I		gspI	TIGR01707
prepilin-type N-terminal cleavage/methylation domain protein			TIGR02532
type II secretion system (T2SS), K family protein			PF03934.8
type II secretion system protein L		gspL	TIGR01709
type II secretion system (T2SS), M family protein			PF04612.7
type 4 prepilin-like proteins leader peptide-processing enzyme	2.1.1.-	hofD	UniRef100_P25960
bacterioferritin		bfr	TIGR00754
bacterioferritin-associated ferredoxin		bfd	UniRef100_P0AE57
putative bifunctional chitinase/lysozyme			UniRef100_P13656
translation elongation factor Tu		tuf	TIGR00485
translation elongation factor G		fusA	TIGR00484
ribosomal protein S7		rpsG	TIGR01029
ribosomal protein S12		rpsL	TIGR00981
sulfur relay protein TusB/DsrH	2.8.-.-	dsrH	TIGR03011
sulfur relay protein TusC/DsrF		tusC	TIGR03010
sulfurtransferase TusD	2.8.1.-	tusD	UniRef100_C4ZUK0
sensory box protein			PF08348.6
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	5.2.1.8	fkpA	UniRef100_P45523
slyX family protein			PF04102.7
FKBP-type peptidyl-prolyl cis-trans isomerase slyD	5.2.1.8	slyD	UniRef100_P0A9L1
conserved hypothetical protein			PF09526.5
glutathione-regulated potassium-efflux system protein kefB		kefB	UniRef100_C4ZUK6
flavodoxin-like fold family protein			PF02525.12
conserved hypothetical protein			UniRef100_P63390
alpha/beta hydrolase fold family protein			PF00561.15
conserved hypothetical protein			PF06794.7
phosphoribulokinase / Uridine kinase family protein			PF00485.13
protein yhfA		yhfA	UniRef100_P0ADX3
bacterial regulatory s, crp family protein			PF00325.15
integral membrane , YccS/YhfK family protein			TIGR01667
acetylornithine/succinyldiaminopimelate aminotransferase	2.6.1.17	argD	UniRef100_P18335
para-aminobenzoate synthase glutamine amidotransferase component II	2.6.1.85	pabA	UniRef100_P00903
putative adenosine monophosphate-protein transferase fic			UniRef100_P20605
conserved hypothetical protein			PF10832.3
peptidyl-prolyl cis-trans isomerase A	5.2.1.8	ppiA	UniRef100_P0AFL5
protein tsgA		tsgA	UniRef100_A7ZSN9
nitrite reductase [NAD(P)H], large subunit	1.7.1.4	nirB	TIGR02374
nitrite reductase [NAD(P)H] small subunit	1.7.1.4	nirD	UniRef100_P0A9I9
putative nitrite transporter			UniRef100_P0AC26
siroheme synthase	4.99.1.4	cysG	UniRef100_B7L4P2
conserved hypothetical protein			PF13978.1
amino acid permease family protein			PF00324.16
SIS domain protein			PF01380.17
xylose isomerase-like TIM barrel family protein			PF01261.19
pfkB carbohydrate kinase family protein			PF00294.19
HTH-type transcriptional regulator frlR		frlR	UniRef100_P45544
aminotransferase class-V family protein			PF00266.14
conserved hypothetical protein			PF10797.4
conserved hypothetical protein			PF10941.3
conserved hypothetical protein			UniRef100_P45548
type I phosphodiesterase / nucleotide pyrophosphatase family protein			PF01663.17
alanine racemase, N-terminal domain protein			PF01168.15
PRD domain protein			PF00874.15
conserved hypothetical protein			UniRef100_C4T7E1
			
tryptophan--tRNA ligase	6.1.1.2	trpS	TIGR00233
phosphoglycolate phosphatase, bacterial	3.1.3.18	gph	TIGR01449
ribulose-phosphate 3-epimerase	5.1.3.1	rpe	TIGR01163
DNA adenine methylase	2.1.1.72	dam	UniRef100_P0AEE9
protein damX		damX	UniRef100_P11557
3-dehydroquinate synthase	4.2.3.4	aroB	TIGR01357
shikimate kinase 1	2.7.1.71	aroK	UniRef100_A7ZSR5
type IV pilus secretin PilQ family protein		pilQ	TIGR02515
conserved hypothetical protein			PF10748.4
putative protein involved in utilization of DNA as a carbon source			UniRef100_P45751
fimbrial assembly family protein			PF05137.8
conserved hypothetical protein			UniRef100_Q3YWM9
penicillin-binding protein 1A	3.4.-.-	mrcA	UniRef100_P02918
ADP compounds hydrolase nudE	3.6.1.-	nudE	UniRef100_P45799
conserved hypothetical protein			UniRef100_P45800
HAD hydrolase, IA, variant 3 family protein			TIGR01509
heat shock protein 15		hslR	UniRef100_P0ACH0
33 kDa chaperonin		hslO	UniRef100_B7UKA5
conserved hypothetical protein			PF13687.1
phosphoenolpyruvate carboxykinase	4.1.1.49	pckA	TIGR00224
osmolarity sensor protein envZ	2.7.13.3	envZ	UniRef100_P0AEJ4
transcriptional regulatory protein ompR		ompR	UniRef100_P0AA18
transcription elongation factor GreB		greB	TIGR01461
protein yhgF		yhgF	UniRef100_P46837
ferrous iron transport protein A		feoA	UniRef100_P0AEL5
ferrous iron transport protein B		feoB	TIGR00437
ferrous iron transport protein C		feoC	UniRef100_A6TF33
conserved hypothetical family protein			TIGR01784
pimelyl-[acyl-carrier protein] methyl ester esterase		bioH	TIGR01738
comF family protein			TIGR00201
fe/S biogenesis protein nfuA		nfuA	UniRef100_A7ZSU3
high-affinity gluconate transporter		gntT	UniRef100_P39835
4-alpha-glucanotransferase	2.4.1.25	malQ	TIGR00217
maltodextrin phosphorylase	2.4.1.1	malP	UniRef100_P00490
HTH-type transcriptional regulator malT		malT	UniRef100_C4ZVX0
RNA 3'-phosphate cyclase	6.5.1.4	rtcA	TIGR03399
RNA-splicing ligase RtcB	6.5.1.-	rtcB	UniRef100_P46850
glycerol-3-phosphate regulon repressor		glpR	UniRef100_P0ACL0
sigma-54 interaction domain protein			PF00158.21
rhomboid family protease GlpG	3.4.21.105	glpG	TIGR04239
thiosulfate sulfurtransferase glpE	2.8.1.1	glpE	UniRef100_A7ZSV5
aerobic glycerol-3-phosphate dehydrogenase	1.1.5.3	glpD	UniRef100_P13035
putative transmembrane protein			UniRef100_P76692
glycogen/starch/alpha-glucan phosphorylases family protein	2.4.1.1	glgP	TIGR02093
glycogen synthase	2.4.1.21	glgA	UniRef100_A7ZSW2
glucose-1-phosphate adenylyltransferase	2.7.7.27	glgC	TIGR02091
glycogen debranching enzyme GlgX	3.2.1.-	glgX	TIGR02100
1,4-alpha-glucan branching enzyme	2.4.1.18	glgB	TIGR01515
aspartate-semialdehyde dehydrogenase	1.2.1.11	asd	TIGR01745
conserved hypothetical protein			UniRef100_P67144
low-affinity gluconate transporter		gntU	UniRef100_P0AC97
thermoresistant gluconokinase	2.7.1.12	gntK	UniRef100_P46859
HTH-type transcriptional regulator gntR		gntR	UniRef100_P0ACP6
putative quercetin 2,3-dioxygenase yhhW			UniRef100_P46852
conserved hypothetical protein			UniRef100_P46853
acetyltransferase family protein			PF00583.19
type VI secretion system effector, Hcp1 family protein			TIGR03344
putative conserved protein			UniRef100_P46856
			
putative transposase			PF03400.8
			
conserved hypothetical protein			UniRef100_P46857
gamma-glutamyltransferase	2.3.2.2	ggt	TIGR00066
glycerophosphoryl diester phosphodiesterase	3.1.4.46	ugpQ	UniRef100_P10908
conserved hypothetical protein			PF10956.3
sn-glycerol-3-phosphate import ATP-binding protein UgpC	3.6.3.20	ugpC	UniRef100_P10907
binding--dependent transport system inner membrane component family protein			PF00528.17
binding--dependent transport system inner membrane component family protein			PF00528.17
bacterial extracellular solute-binding family protein			PF13416.1
high-affinity branched-chain amino acid transport ATP-binding protein LivF		livF	UniRef100_P22731
ABC transporter family protein			PF00005.22
branched-chain amino acid transport system / permease component family protein			PF02653.11
high-affinity branched-chain amino acid transport system permease protein livH		livH	UniRef100_P0AEX8
leucine-specific-binding protein		livK	UniRef100_P0A1W7
conserved hypothetical protein			UniRef100_P37613
leu/Ile/Val/Thr-binding protein		livJ	UniRef100_P17215
alternative sigma factor RpoH		rpoH	TIGR02392
putative protein insertion permease FtsX			TIGR00439
cell division ATP-binding protein FtsE		ftsE	TIGR02673
signal recognition particle-docking protein FtsY		ftsY	TIGR00064
RNA methyltransferase, RsmD family	2.1.1.-		TIGR00095
conserved hypothetical protein			PF06611.7
conserved hypothetical protein			PF10694.4
yhhN-like family protein			PF07947.9
cadmium-translocating P-type ATPase	3.6.3.3	cadA	TIGR01512
sulfurtransferase TusA	2.8.1.-	tusA	UniRef100_A7ZT06
inner membrane protein yhhQ		yhhQ	UniRef100_P37619
protein dcrB		dcrB	UniRef100_P0AEE1
conserved hypothetical protein			UniRef100_P37621
conserved hypothetical protein			UniRef100_P0AGM1
4'-phosphopantetheinyl transferase superfamily protein			PF01648.15
nickel ABC transporter, nickel/metallophore periplasmic binding protein		nikA	TIGR02294
nickel ABC transporter, permease subunit NikB	3.6.3.24	nikB	TIGR02789
nickel ABC transporter, permease subunit NikC	3.6.3.24	nikC	TIGR02790
nickel import ATP-binding protein NikD		nikD	TIGR02770
nickel import ATP-binding protein NikE	3.6.3.24	nikE	TIGR02769
nickel-responsive transcriptional regulator NikR		nikR	TIGR02793
RHS repeat-associated core domain protein			TIGR03696
			
			
H repeat-associated protein yhhI		yhhI	UniRef100_P28912
inner membrane transport permease yhhJ		yhhJ	UniRef100_P0AGH1
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
efflux transporter, RND family, MFP subunit			TIGR01730
conserved hypothetical protein			PF13258.1
			
conserved hypothetical protein			PF13258.1
inner membrane protein yhiM		yhiM	UniRef100_P37630
flavo, HI0933 family protein			TIGR00275
low-affinity inorganic phosphate transporter 1		pitA	UniRef100_P0AFJ9
universal stress B family protein			PF10625.4
universal stress protein A		uspA	UniRef100_P0AED2
dipeptide and tripeptide permease B		dtpB	UniRef100_P36837
SAM-dependent methyltransferase family protein			PF04445.8
oligopeptidase A	3.4.24.70	prlC	UniRef100_P27237
conserved hypothetical protein			UniRef100_P37634
glutathione-disulfide reductase	1.8.1.7	gor	TIGR01421
conserved hypothetical protein			UniRef100_D7ZBV3
bacterial regulatory , arsR family protein			PF01022.15
arsenical pump membrane protein		arsB	UniRef100_P0AB94
arsenate reductase	1.20.4.1	arsC	TIGR00014
putative predicted protein			UniRef100_P37635
transposase DDE domain protein			PF01609.16
			
outer membrane protein slp		slp	UniRef100_P37194
bacterial regulatory s, luxR family protein			PF00196.14
mgtC family protein			PF02308.11
protein hdeB		hdeB	UniRef100_P0AET3
chaperone-like protein hdeA		hdeA	UniRef100_P0AET0
protein hdeD		hdeD	UniRef100_P0AET6
transcriptional regulator gadE		gadE	UniRef100_P63206
			
multidrug resistance protein mdtE		mdtE	UniRef100_P37636
multidrug resistance protein MdtF		mdtF	UniRef100_P37637
HTH-type transcriptional regulator gadW		gadW	UniRef100_P63202
HTH-type transcriptional regulator gadX		gadX	UniRef100_P37639
glutamate decarboxylase	4.1.1.15		TIGR01788
cytochrome c family protein			PF00034.16
trehalase family protein			PF01204.13
putative HTH-type transcriptional regulator yhjB			UniRef100_P37640
conserved hypothetical protein			UniRef100_P37641
inner membrane protein YhjD		yhjD	TIGR00766
inner membrane metabolite transport protein yhjE		yhjE	UniRef100_P37643
asmA family protein			PF05170.9
cyclic di-GMP phosphodiesterase YhjH	3.1.4.52	yhjH	UniRef100_P37646
pfkB carbohydrate kinase family protein			PF00294.19
protein yhjJ		yhjJ	UniRef100_P37648
aerobic C4-dicarboxylate transport protein		dctA	UniRef100_A7ZT69
putative predicted protein			UniRef100_C1HSC4
protein YhjK		yhjK	UniRef100_P37649
cellulose synthase operon protein C		bcsC	UniRef100_P37650
endoglucanase	3.2.1.4	bcsZ	UniRef100_P37651
cyclic di-GMP-binding protein		bcsB	UniRef100_P37652
cellulose synthase catalytic subunit [UDP-forming]	2.4.1.12	bcsA	UniRef100_P37653
cellulose synthase operon protein YhjQ		yhjQ	TIGR03371
conserved hypothetical protein			PF10945.3
cellulose biosynthesis protein BcsE		bcsE	TIGR03369
celllulose biosynthesis operon protein BcsF/YhjT		bcsF	TIGR03493
conserved hypothetical protein			PF11658.3
toxin Ldr, type I toxin-antitoxin system family protein			PF13940.1
inner membrane transport protein YhjV		yhjV	UniRef100_P37660
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein			TIGR01727
dipeptide transport system permease protein dppC		dppC	UniRef100_P0AEG3
binding--dependent transport system inner membrane component family protein			PF00528.17
			
bacterial extracellular solute-binding s, 5 Middle family protein			PF00496.17
conserved hypothetical protein			UniRef100_Q1R551
phosphoethanolamine transferase eptB	2.7.-.-	eptB	UniRef100_P37661
inner membrane protein yhjX		yhjX	UniRef100_P37662
outer membrane autotransporter barrel domain protein			TIGR01414
DNA-3-methyladenine glycosylase 1	3.2.2.20	tag	UniRef100_P05100
molybdopterin guanine dinucleotide-containing S/N-oxide reductases family protein			TIGR00509
acetyltransferase family protein			PF00583.19
inner membrane lipoprotein yiaD		yiaD	UniRef100_P37665
glyoxylate/hydroxypyruvate reductase B	1.1.1.215	ghrB	UniRef100_C4ZXE2
conserved hypothetical protein			PF11254.3
helix-turn-helix family protein			PF01381.17
cold shock protein CspA		cspA	UniRef100_P0A9Y1
			
protein HokA		hokA	UniRef100_P37305
helix-turn-helix domain protein			PF13518.1
integrase core domain protein			PF00665.21
glycyl-tRNA synthetase beta subunit	6.1.1.14	glyS	UniRef100_C4ZXE9
glycyl-tRNA synthetase alpha subunit	6.1.1.14	glyQ	UniRef100_P00960
ysaB-like lipofamily protein			PF13983.1
inner membrane protein YiaH		yiaH	UniRef100_P37669
inner membrane protein yiaA		yiaA	UniRef100_P0ADJ8
inner membrane protein yiaB		yiaB	UniRef100_P11286
xylulokinase	2.7.1.17	xylB	TIGR01312
xylose isomerase	5.3.1.5	xylA	TIGR02630
D-xylose ABC transporter, D-xylose-binding protein		xylF	TIGR02634
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
branched-chain amino acid transport system / permease component family protein			PF02653.11
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein			PF01832.15
alpha-amylase	3.2.1.1	malS	UniRef100_P25718
aminotransferase class I and II family protein			PF00155.16
electron transport protein hydN		hydN	UniRef100_P0AAK6
HTH-type transcriptional regulator yiaJ		yiaJ	UniRef100_P37671
2,3-diketo-L-gulonate reductase	1.1.1.130	dlgD	UniRef100_C4ZXG6
conserved hypothetical protein			TIGR00022
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM		yiaM	UniRef100_P37674
TRAP transporter, DctM subunit			TIGR00786
2,3-diketo-L-gulonate-binding periplasmic protein yiaO		yiaO	UniRef100_P37676
L-xylulose/3-keto-L-gulonate kinase	2.7.1.53	lyx	UniRef100_P37677
3-keto-L-gulonate-6-phosphate decarboxylase sgbH	4.1.1.85	sgbH	UniRef100_P37678
xylose isomerase-like TIM barrel family protein			PF01261.19
L-ribulose-5-phosphate 4-epimerase	5.1.3.4	araD	TIGR00760
mltA-interacting MipA family protein			PF06629.7
inner membrane protein yiaV		yiaV	UniRef100_P37683
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
inner membrane protein yiaW		yiaW	UniRef100_P0ADK5
conserved hypothetical protein			UniRef100_F4TM31
aldehyde dehydrogenase B	1.2.1.-	aldB	UniRef100_P37685
iron-containing alcohol dehydrogenase family protein			PF13685.1
selenocysteine-specific translation elongation factor		selB	TIGR00475
L-seryl-tRNA selenium transferase	2.9.1.1	selA	TIGR00474
glutathione S-transferase, C-terminal domain protein			PF00043.20
RHS repeat-associated core domain protein			TIGR03696
protein yibA		yibA	UniRef100_P0ADK7
RHS repeat-associated core domain protein			TIGR03696
			
inner membrane protein yibH		yibH	UniRef100_P0AFV1
inner membrane protein yiaW		yiaW	UniRef100_P0ADK5
PTS system mannitol-specific EIICBA component	2.7.1.-	mtlA	UniRef100_P00550
mannitol-1-phosphate 5-dehydrogenase	1.1.1.17	mtlD	UniRef100_C4ZXJ1
mannitol operon repressor		mtlR	UniRef100_P0AF11
conserved hypothetical protein			UniRef100_Q0TBK7
conserved hypothetical protein			UniRef100_P0ADL0
L-lactate permease		lldP	UniRef100_P33231
bacterial regulatory s, gntR family protein			PF00392.16
L-lactate dehydrogenase [cytochrome]	1.1.2.3	lldD	UniRef100_C4ZXJ7
tRNA (cytidine(34)-2'-O)-methyltransferase	2.1.1.207	trmL	TIGR00185
serine O-acetyltransferase	2.3.1.30	cysE	TIGR01172
NAD-dependent glycerol-3-phosphate dehydrogenase family protein			PF01210.18
protein-export chaperone SecB		secB	TIGR00809
glutaredoxin 3		grxC	TIGR02181
rhodanese-like domain protein			PF00581.15
2,3-bisphosphoglycerate-independent phosphoglycerate mutase	5.4.2.1	gpmI	TIGR01307
murein hydrolase activator EnvC		envC	UniRef100_P37690
glycosyl transferase 2 family protein			PF00535.21
divergent polysaccharide deacetylase family protein			PF04748.8
L-threonine 3-dehydrogenase	1.1.1.103	tdh	TIGR00692
2-amino-3-ketobutyrate coenzyme A ligase	2.3.1.29	kbl	TIGR01822
conserved hypothetical protein			PF09612.5
ADP-glyceromanno-heptose 6-epimerase	5.1.3.20	rfaD	TIGR02197
lipopolysaccharide heptosyltransferase II	2.4.-.-	rfaF	TIGR02195
lipopolysaccharide heptosyltransferase I	2.4.-.-	rfaC	TIGR02193
O-antigen ligase		rfaL	UniRef100_P27243
glycosyltransferase 9 family protein			PF01075.12
conserved hypothetical protein			PF01973.13
lipopolysaccharide core heptose(II) kinase rfaY	2.7.1.-	rfaY	UniRef100_Q9ZIS7
lipopolysaccharide 1,2-glucosyltransferase	2.4.1.58	rfaJ	UniRef100_P27129
glycosyl transferase 8 C-terminal family protein			PF08437.5
lipopolysaccharide 1,6-galactosyltransferase	2.4.1.-	rfaB	UniRef100_P27127
lipopolysaccharide core biosynthesis protein rfaS		rfaS	UniRef100_P27126
lipopolysaccharide core heptose(I) kinase rfaP	2.7.1.-	rfaP	UniRef100_Q9R9D6
lipopolysaccharide core biosynthesis protein rfaG	2.4.-.-	rfaG	UniRef100_P25740
putative lipopolysaccharide heptosyltransferase III			TIGR02201
glycosyl transferases group 1 family protein			PF00534.15
pantetheine-phosphate adenylyltransferase	2.7.7.3	coaD	TIGR01510
formamidopyrimidine-DNA glycosylase	3.2.2.23	mutM	TIGR00577
ribosomal protein L33		rpmG	TIGR01023
ribosomal protein L28		rpmB	TIGR00009
DNA repair RadC family protein			TIGR00608
phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase	4.1.1.36	coaBC	TIGR00521
deoxyuridine 5'-triphosphate nucleotidohydrolase	3.6.1.23	dut	UniRef100_C4ZXN2
HTH-type protein slmA		slmA	UniRef100_A7ZTJ2
orotate phosphoribosyltransferase	2.4.2.10	pyrE	UniRef100_B7UM49
ribonuclease PH	2.7.7.56	rph	TIGR01966
conserved hypothetical protein			UniRef100_P23839
putative dNA-damage-inducible protein D			UniRef100_P23840
DNA ligase B	6.5.1.2	ligB	UniRef100_C4ZXN9
conserved hypothetical protein			UniRef100_P0AGM3
guanylate kinase	2.7.4.8	gmk	TIGR03263
DNA-directed RNA polymerase, omega subunit	2.7.7.6	rpoZ	TIGR00690
bifunctional (p)ppGpp synthase/hydrolase SpoT	3.1.7.2	spoT	UniRef100_P0AG25
tRNA guanosine-2'-O-methyltransferase	2.1.1.34	trmH	UniRef100_P0AGJ3
ATP-dependent DNA helicase RecG	3.6.4.12	recG	TIGR00643
sodium/glutamate symporter		gltS	TIGR00210
uracil-xanthine permease family protein			TIGR00801
conserved hypothetical protein			PF05359.6
alpha-xylosidase	3.2.1.-	yicI	UniRef100_P31434
inner membrane symporter yicJ		yicJ	UniRef100_P31435
sugar efflux transporter C		setC	UniRef100_P31436
conserved hypothetical protein			UniRef100_P31437
lipoprotein 28		nlpA	UniRef100_P04846
conserved hypothetical protein			UniRef100_Q83IY9
purine ribonucleoside efflux pump nepI		nepI	UniRef100_C4ZXQ4
conserved hypothetical protein			PF06711.6
putative permease yicO			UniRef100_P31440
adenine deaminase	3.5.4.2	ade	TIGR01178
hexose phosphate transport protein		uhpT	UniRef100_P0AGC1
regulatory protein uhpC		uhpC	UniRef100_P09836
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein			PF02518.21
transcriptional regulatory protein uhpA		uhpA	UniRef100_P0AGA8
acetolactate synthase isozyme 1 small subunit	2.2.1.6	ilvN	UniRef100_P0ADG0
acetolactate synthase, large subunit, biosynthetic type	2.2.1.6	ilvB	TIGR00118
multidrug resistance protein D		emrD	UniRef100_P31442
putative dNA-binding transcriptional regulator			UniRef100_P31443
inner membrane protein yidG		yidG	UniRef100_P0ADL8
conserved hypothetical protein			PF02656.10
inner membrane protein yidI		yidI	UniRef100_P31446
sulfatase family protein			PF00884.18
conserved hypothetical protein			UniRef100_P31448
family 4 glycosyl hydrolase C-terminal domain protein			PF11975.3
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
6-phospho-alpha-glucosidase	3.2.1.122	aglB	UniRef100_Q9AGA6
PTS system, glucose-like IIB component domain protein	2.7.1.69		TIGR00826
PTS system, alpha-glucoside-specific IIBC component domain protein	2.7.1.69		TIGR02005
aspT/YidE/YbjL antiporter duplication domain protein			TIGR01625
conserved hypothetical protein			UniRef100_P31453
small heat shock protein ibpB		ibpB	UniRef100_A7ZTP0
small heat shock protein ibpA		ibpA	UniRef100_A7ZTP1
conserved hypothetical protein			PF07119.7
conserved hypothetical protein			PF12566.3
D-galactonate transporter		dgoT	UniRef100_P0AA77
FAD binding domain protein			PF01494.14
D-galactonate dehydratase	4.2.1.6	dgoD	UniRef100_B1LL17
2-dehydro-3-deoxy-6-phosphogalactonate aldolase	4.1.2.21	dgoA	UniRef100_Q6BF16
2-oxo-3-deoxygalactonate kinase		dgoK	UniRef100_A6TFZ6
bacterial regulatory s, gntR family protein			PF00392.16
conserved hypothetical protein			UniRef100_P0ADM6
phosphatase YidA	3.1.3.-	yidA	UniRef100_P0A8Y6
conserved hypothetical protein			PF06078.6
DNA gyrase, B subunit	5.99.1.3	gyrB	TIGR01059
DNA replication and repair protein recF		recF	UniRef100_A7ZTQ6
DNA polymerase III, beta subunit	2.7.7.7	dnaN	TIGR00663
chromosomal replication initiator protein DnaA		dnaA	TIGR00362
ribonuclease P protein component	3.1.26.5	rnpA	TIGR00188
inner membrane protein oxaA		oxaA	UniRef100_C4ZYY3
tRNA modification GTPase TrmE	3.6.-.-	trmE	TIGR00450
tryptophanase	4.1.99.1	tnaA	TIGR02617
low affinity tryptophan permease		tnaB	UniRef100_P23173
multidrug resistance protein mdtL		mdtL	UniRef100_B7L855
HTH-type transcriptional regulator yidZ		yidZ	UniRef100_C4ZYY9
putative phosphopantetheinyl transferase			UniRef100_C8TYY5
NADPH-dependent FMN reductase family protein			PF03358.10
putative adenine permease PurP			UniRef100_P31466
HAD hydrolase, IA, variant 1 family protein			TIGR01549
inner membrane protein CbrB		cbrB	UniRef100_P31468
conserved hypothetical protein			PF03691.9
glucosamine-6-phosphate isomerases/6-phosphogluconolactonase family protein			PF01182.15
conserved hypothetical protein			UniRef100_P31471
cryptic outer membrane porin BglH		bglH	UniRef100_P26218
cellulase family protein			PF00150.13
PTS system beta-glucoside-specific EIIBCA component	2.7.1.-	bglF	UniRef100_P08722
cryptic beta-glucoside bgl operon antiterminator		bglG	UniRef100_P11989
phosphate transport system regulatory protein PhoU		phoU	TIGR02135
phosphate ABC transporter, ATP-binding protein	3.6.3.27	pstB	TIGR00972
phosphate ABC transporter, permease protein PstA		pstA	TIGR00974
phosphate ABC transporter, permease protein PstC		pstC	TIGR02138
phosphate ABC transporter, phosphate-binding protein PstS		pstS	TIGR00975
glutamine-fructose-6-phosphate transaminase	2.6.1.16	glmS	TIGR01135
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	2.7.7.23	glmU	TIGR01173
ATP synthase F1, epsilon subunit	3.6.3.14	atpC	TIGR01216
ATP synthase F1, beta subunit	3.6.3.14	atpD	TIGR01039
ATP synthase F1, gamma subunit	3.6.3.14	atpG	TIGR01146
ATP synthase F1, alpha subunit	3.6.3.14	atpA	TIGR00962
ATP synthase F1, delta subunit	3.6.3.14	atpH	TIGR01145
ATP synthase F0, B subunit	3.6.3.14	atpF	TIGR01144
ATP synthase F0, C subunit	3.6.3.14	atpE	TIGR01260
ATP synthase F0, A subunit	3.6.3.14	atpB	TIGR01131
putative membrane protein			TMHMM
16S rRNA (guanine(527)-N(7))-methyltransferase GidB	2.1.1.170	gidB	TIGR00138
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA		gidA	TIGR00136
protein mioC		mioC	UniRef100_P03817
regulatory protein AsnC		asnC	UniRef100_P0ACI8
aspartate--ammonia ligase	6.3.1.1	asnA	TIGR00669
VWA domain containing CoxE-like family protein			PF05762.9
ATPase ravA	3.6.3.-	ravA	UniRef100_C4ZZ24
potassium uptake protein		kup	TIGR00794
rbsD / FucU transport family protein			PF05025.8
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
branched-chain amino acid transport system / permease component family protein			PF02653.11
D-ribose-binding periplasmic protein		rbsB	UniRef100_P0A2C6
ribokinase	2.7.1.15	rbsK	TIGR02152
putative transport protein hsrA			UniRef100_P31474
ribose operon repressor		rbsR	UniRef100_P0ACQ2
bacterial regulatory s, gntR family protein			PF00392.16
			
			
			
			
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
conserved hypothetical protein			UniRef100_P0ADN4
sigma-54 interaction domain protein			PF00158.21
thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein			PF02776.13
thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein			PF02775.16
acetolactate synthase isozyme 2 small subunit	2.2.1.6	ilvM	UniRef100_P0ADG2
branched-chain amino acid aminotransferase	2.6.1.42	ilvE	TIGR01122
dihydroxy-acid dehydratase	4.2.1.9	ilvD	TIGR00110
threonine ammonia-lyase, biosynthetic	4.3.1.19	ilvA	TIGR01124
bacterial regulatory helix-turn-helix , lysR family protein			PF00126.22
ketol-acid reductoisomerase	1.1.1.86	ilvC	TIGR00465
peptidyl-prolyl cis-trans isomerase C	5.2.1.8	ppiC	UniRef100_P0A9L7
			
ATP-dependent DNA helicase Rep	3.6.4.12	rep	TIGR01074
ppx/GppA phosphatase family protein			PF02541.11
ATP-dependent RNA helicase rhlB	3.6.4.13	rhlB	UniRef100_A7ZTY2
thioredoxin		trxA	TIGR01068
transcription termination factor Rho	3.6.4.-	rho	TIGR00767
conserved hypothetical protein			UniRef100_F4SRI9
undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	2.7.8.33	wecA	TIGR02380
lipopolysaccharide biosynthesis protein wzzE		wzzE	UniRef100_P0AG01
UDP-N-acetylglucosamine 2-epimerase	5.1.3.14		TIGR00236
nucleotide sugar dehydrogenase family protein			TIGR03026
dTDP-glucose 4,6-dehydratase	4.2.1.46	rfbB	TIGR01181
glucose-1-phosphate thymidylyltransferase	2.7.7.24	rfbA	TIGR01207
TDP-D-fucosamine acetyltransferase		wecD	TIGR02382
TDP-4-keto-6-deoxy-D-glucose transaminase family protein		wecE	TIGR02379
protein wzxE		wzxE	UniRef100_P0AAA7
4-alpha-L-fucosyltransferase	2.4.1.-	wecF	UniRef100_C4ZZ60
wzyE family protein			PF06899.6
glycosyltransferase, WecB/TagA/CpsF family protein	2.4.1.-		TIGR00696
putative transport protein YifK			UniRef100_P27837
anaerobic sulfatase maturase	1.1.99.-		TIGR03942
type I phosphodiesterase / nucleotide pyrophosphatase family protein			PF01663.17
hemY family protein			PF07219.8
putative uroporphyrinogen-III C-methyltransferase			UniRef100_P09127
uroporphyrinogen-III synthase HemD family protein			PF02602.10
porphobilinogen deaminase	2.5.1.61	hemC	TIGR00212
adenylate cyclase, class-I family protein			PF01295.13
iron donor protein CyaY		cyaY	TIGR03421
putative gatC			UniRef100_P11291
prokaryotic lipo-attachment site family protein			PF13627.1
diaminopimelate epimerase	5.1.1.7	dapF	TIGR00652
conserved hypothetical protein			PF04340.7
tyrosine recombinase XerC		xerC	TIGR02224
HAD hydrolase, IA, variant 1 family protein			TIGR01549
DNA helicase II	3.6.4.12	uvrD	TIGR01075
conserved hypothetical protein			PF09992.4
magnesium and cobalt transport protein CorA		corA	TIGR00383
conserved hypothetical protein			PF10947.3
inner membrane protein yigG		yigG	UniRef100_P27843
protein rarD		rarD	UniRef100_P27844
conserved hypothetical protein			UniRef100_Q8E9M7
phospholipase A1	3.1.1.4	pldA	UniRef100_P0A922
ATP-dependent DNA helicase RecQ	3.6.4.12	recQ	TIGR01389
threonine efflux protein		rhtC	UniRef100_P0AG39
homoserine/homoserine lactone efflux protein		rhtB	UniRef100_P0AG36
alpha/beta hydrolase fold family protein			PF00561.15
conserved protein, phosphatase-like domain		yigL	UniRef100_A6TGK6
			
carboxylate/amino acid/amine transporter family protein		yedA	TIGR00950
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	2.1.1.14	metE	TIGR01371
putative dienelactone hydrolase			UniRef100_F3Q044
uridine phosphorylase	2.4.2.3	udp	TIGR01718
DNA recombination protein rmuC		rmuC	UniRef100_P0AG72
ubiquinone/menaquinone biosynthesis methyltransferase ubiE	2.1.1.201	ubiE	UniRef100_A7ZU40
conserved hypothetical protein			UniRef100_P0ADP7
2-polyprenylphenol 6-hydroxylase	1.14.13.-	ubiB	TIGR01982
twin arginine-targeting translocase, TatA/E family protein		tatA	TIGR01411
twin arginine-targeting protein translocase TatB		tatB	TIGR01410
twin arginine-targeting protein translocase TatC		tatC	TIGR00945
transcriptional activator RfaH		rfaH	TIGR01955
deoxyribonuclease tatD	3.1.21.-	tatD	UniRef100_P27859
ubiD decarboxylase family protein	4.1.1.-	ubiD	TIGR00148
NAD(P)H-flavin reductase		fre	UniRef100_P0AEN3
acetyl-CoA C-acyltransferase FadA	2.3.1.16	fadA	TIGR02445
fatty oxidation complex, alpha subunit FadB	4.2.1.17	fadB	TIGR02437
xaa-Pro dipeptidase	3.4.13.9	pepQ	UniRef100_A7ZU52
conserved hypothetical protein			PF09186.6
potassium uptake protein TrkH			UniRef100_A6B913
protoporphyrinogen IX dehydrogenase [menaquinone]	1.3.5.3	hemG	UniRef100_P0ACB6
			
			
conserved hypothetical protein			UniRef100_Q1R8D8
			
molybdopterin-guanine dinucleotide biosynthesis protein B		mobB	TIGR00176
molybdopterin-guanine dinucleotide biosynthesis protein A		mobA	TIGR02665
protein yihD		yihD	UniRef100_P0ADQ1
phosphotransferase enzyme family protein			PF01636.18
thiol:disulfide interchange protein DsbA		dsbA	UniRef100_P0AEG5
conserved hypothetical protein			PF06097.6
putative acyltransferase yihG			UniRef100_P32129
conserved hypothetical protein			UniRef100_E8HN36
DNA polymerase I	2.7.7.7	polA	UniRef100_P00582
ribosome biogenesis GTP-binding protein YsxC		ysxC	TIGR03598
			
der GTPase-activating protein YihI		yihI	UniRef100_A7ZU67
oxygen-independent coproporphyrinogen III oxidase	1.3.99.22	hemN	TIGR00538
conserved hypothetical protein			UniRef100_F4MAJ1
nitrogen regulation protein NR		ntrC	TIGR01818
nitrogen regulation protein NR	2.7.13.3	glnL	UniRef100_P0AFB6
glutamine synthetase, type I	6.3.1.2	glnA	TIGR00653
GTP-binding protein TypA/BipA		typA	TIGR01394
bacterial regulatory s, gntR family protein			PF00392.16
xylose isomerase-like TIM barrel family protein			PF01261.19
inner membrane protein yihN		yihN	UniRef100_P32135
porin ompL		ompL	UniRef100_P76773
inner membrane symporter yihP		yihP	UniRef100_P32137
inner membrane symporter yihP		yihP	UniRef100_P32137
glycosyl hydrolases 31 family protein			PF01055.21
aldose 1-epimerase family protein			PF01263.15
conserved hypothetical protein			UniRef100_P32140
conserved hypothetical protein			UniRef100_Q9L7R9
NAD binding domain of 6-phosphogluconate dehydrogenase family protein			PF03446.10
pfkB carbohydrate kinase family protein			PF00294.19
glycerol-3-phosphate regulon repressor		glpR	UniRef100_P0ACL0
phosphatase yihX	3.1.3.-	yihX	UniRef100_P0A8Y3
conserved hypothetical protein			UniRef100_A7ZU91
D-tyrosyl-tRNA(Tyr) deacylase	3.1.-.-	dtd	TIGR00256
putative thioesterase domain protein			TIGR02447
ribbon-helix-helix , copG family protein			PF01402.16
conserved hypothetical protein			UniRef100_P0AFU6
			
formate dehydrogenase accessory protein FdhE		fdhE	TIGR01562
formate dehydrogenase, gamma subunit	1.2.1.2		TIGR01583
formate dehydrogenase, beta subunit	1.2.1.2	fdxH	TIGR01582
formate dehydrogenase, alpha subunit	1.2.1.2		TIGR01553
molybdopterin oxidoreductase family protein			PF00384.17
conserved hypothetical protein			UniRef100_Q1R421
formate dehydrogenase family accessory protein FdhD			TIGR00129
conserved hypothetical protein			PF12889.2
putative frv operon regulatory protein			UniRef100_P32152
putative aminopeptidase ysdC			UniRef100_P94521
PTS system, Fru family, IIB component domain protein	2.7.1.69		TIGR00829
fructose-like phosphotransferase enzyme IIA component	2.7.1.-	frvA	UniRef100_P32155
L-rhamnose 1-epimerase	5.1.3.-	rhaU	TIGR02625
rhamnulose-1-phosphate aldolase	4.1.2.19	rhaD	TIGR02624
L-rhamnose isomerase	5.3.1.14	rhaA	TIGR01748
rhamnulokinase	2.7.1.5	rhaB	TIGR02627
cupin domain protein			PF07883.6
L-rhamnose-proton symporter		rhaT	UniRef100_C5A075
HTH-type transcriptional activator rhaR		rhaR	UniRef100_C5A074
superoxide dismutase [Mn]	1.15.1.1	sodA	UniRef100_P00448
2-keto-3-deoxygluconate transporter		kdgT	TIGR00793
protein yiiM		yiiM	UniRef100_P32157
sensor protein CpxA	2.7.13.3	cpxA	UniRef100_P0AE84
transcriptional regulatory protein CpxR		cpxR	UniRef100_P0AE89
periplasmic protein CpxP		cpxP	UniRef100_P0AE86
ferrous-iron efflux pump FieF		fieF	UniRef100_A7ZUC8
6-phosphofructokinase	2.7.1.11	pfkA	TIGR02482
sulfate-binding protein		sbp	UniRef100_P02906
CDP-diacylglycerol pyrophosphatase	3.6.1.26	cdh	TIGR00672
triose-phosphate isomerase	5.3.1.1	tpiA	TIGR00419
conserved hypothetical protein			PF07305.7
conserved hypothetical protein			PF05656.9
conserved hypothetical protein			UniRef100_P32162
universal stress family protein			PF00582.21
ferredoxin--NADP reductase	1.18.1.2	fpr	UniRef100_P28861
fructose-1,6-bisphosphatase, class II	3.1.3.11	glpX	TIGR00330
glycerol kinase	2.7.1.30	glpK	TIGR01311
glycerol uptake facilitator protein		glpF	UniRef100_P0AER2
cell division protein ZapB		zapB	UniRef100_A7ZUE3
regulator of ribonuclease activity A		rraA	TIGR02998
1,4-dihydroxy-2-naphthoate octaprenyltransferase	2.5.1.74	menA	TIGR00751
ATP-dependent protease HslVU, ATPase subunit		hslU	TIGR00390
ATP-dependent protease HslVU, peptidase subunit	3.4.25.2	hslV	TIGR03692
cell division protein FtsN		ftsN	TIGR02223
periplasmic binding s and sugar binding domain of LacI family protein			PF00532.16
primosomal protein N'	3.6.1.-	priA	TIGR00595
ribosomal protein L31		rpmE	TIGR00105
conserved hypothetical protein			UniRef100_C3SIU7
met Apo-repressor, MetJ family protein			PF01340.15
O-succinylhomoserine (thiol)-lyase	2.5.1.48	metB	TIGR02080
bifunctional aspartokinase/homoserine dehydrogenase 2	1.1.1.3	metL	UniRef100_P00562
5,10-methylenetetrahydrofolate reductase	1.5.1.20	metF	TIGR00676
catalase/peroxidase HPI	1.11.1.6	katG	TIGR00198
conserved hypothetical protein			UniRef100_P0ABT9
conserved hypothetical protein			PF06940.6
glycerol dehydrogenase	1.1.1.6	gldA	UniRef100_P0A9S6
fructose-6-phosphate aldolase	4.1.2.-	fsa	TIGR00875
phosphoenolpyruvate-protein phosphotransferase	2.7.3.9	ptsP	TIGR01417
PTS system, Fru family, IIC component domain protein			TIGR01427
fructose-like phosphotransferase enzyme IIB component 2	2.7.1.69	frwB	UniRef100_P69818
glycerol dehydratase		dhaB1	UniRef100_Q8GEZ8
glycyl-radical enzyme activating family protein	1.97.1.-		TIGR02494
bacterial regulatory helix-turn-helix s, AraC family protein			PF00165.18
fructose-like phosphotransferase enzyme IIB component 2	2.7.1.69	frwB	UniRef100_P69818
phosphoethanolamine transferase CptA	2.7.-.-	cptA	UniRef100_P0CB39
phosphoenolpyruvate carboxylase family protein			PF00311.12
acetylornithine deacetylase	3.5.1.16	argE	TIGR01892
N-acetyl-gamma-glutamyl-phosphate reductase	1.2.1.38	argC	TIGR01850
acetylglutamate kinase	2.7.2.8	argB	TIGR00761
argininosuccinate lyase	4.3.2.1	argH	TIGR00838
pyridine nucleotide-disulfide oxidoreductase family protein			PF07992.9
hydrogen peroxide-inducible gene activator		oxyR	UniRef100_P0ACQ6
bacterial regulatory s, tetR family protein			PF00440.18
inner membrane protein yijD		yijD	UniRef100_P0AF42
tRNA (uracil-5-)-methyltransferase	2.1.1.35	trmA	TIGR02143
tonB-dependent vitamin B12 receptor		btuB	TIGR01779
glutamate racemase	5.1.1.3	murI	TIGR00067
			
			
			
			
UDP-N-acetylenolpyruvoylglucosamine reductase	1.1.1.158	murB	TIGR00179
bifunctional protein BirA	6.3.4.15	birA	UniRef100_P06709
pantothenate kinase	2.7.1.33	coaA	TIGR00554
conserved hypothetical protein			UniRef100_F5MTA3
translation elongation factor Tu		tuf	TIGR00485
preprotein translocase, SecE subunit		secE	TIGR00964
transcription termination/antitermination factor NusG		nusG	TIGR00922
ribosomal protein L11		rplK	TIGR01632
ribosomal protein L1		rplA	TIGR01169
50S ribosomal protein L10		rplJ	UniRef100_A7ZUJ8
ribosomal protein L7/L12		rplL	TIGR00855
DNA-directed RNA polymerase, beta subunit	2.7.7.6	rpoB	TIGR02013
DNA-directed RNA polymerase, beta' subunit	2.7.7.6	rpoC	TIGR02386
heat shock protein C		htrC	UniRef100_P27375
			
thiazole biosynthesis protein ThiH		thiH	TIGR02351
thiazole synthase	4.-.-.-	thiG	UniRef100_C5A0T1
thiamine biosynthesis protein ThiS		thiS	TIGR01683
thiazole biosynthesis adenylyltransferase ThiF	2.7.7.73	thiF	TIGR02356
thiamine-phosphate pyrophosphorylase	2.5.1.3	thiE	UniRef100_A7ZUK8
thiamine biosynthesis protein ThiC		thiC	TIGR00190
regulator of sigma D		rsd	UniRef100_A7ZUL0
NUDIX domain protein			PF00293.23
uroporphyrinogen decarboxylase	4.1.1.37	hemE	TIGR01464
endonuclease V	3.1.21.7	nfi	UniRef100_B7UPF3
conserved hypothetical protein			PF04222.7
DNA-binding protein HU-alpha		hupA	UniRef100_P0ACF2
conserved hypothetical protein			PF07356.7
zinc resistance-associated protein		zraP	UniRef100_P0AAB0
sensor protein zraS	2.7.13.3	zraS	UniRef100_P14377
phosphoribosylamine--glycine ligase	6.3.4.13	purD	UniRef100_P15640
transcriptional regulatory protein zraR		zraR	UniRef100_P14375
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	2.1.2.3	purH	TIGR00355
			
			
conserved hypothetical protein			UniRef100_Q1RFY5
			
putative stress response protein			UniRef100_P09162
conserved hypothetical protein			UniRef100_P09163
homoserine O-succinyltransferase	2.3.1.46	metA	TIGR01001
malate synthase A	2.3.3.9	aceB	TIGR01344
			
isocitrate lyase	4.1.3.1	aceA	TIGR01346
shET2 enterotoxin, N-terminal region family protein			PF07906.8
isocitrate dehydrogenase kinase/phosphatase	3.1.3.-	aceK	UniRef100_C5A0V3
acetate operon repressor		iclR	UniRef100_P16528
methionine synthase	2.1.1.13	metH	TIGR02082
sodium-dependent inorganic phosphate (Pi) transporter family protein		PNaS	TIGR01013
peptidase E	3.4.13.21	pepE	UniRef100_A7ZUN5
ribosomal large subunit pseudouridine synthase F	5.4.99.21	rluF	UniRef100_P32684
conserved hypothetical protein			PF11656.3
aspartate kinase, monofunctional class	2.7.2.4		TIGR00656
glucose-6-phosphate isomerase	5.3.1.9	pgi	UniRef100_B7LAX0
exopolysaccharide production YjbE family protein			PF11106.3
conserved hypothetical protein			UniRef100_P75884
putative protein			UniRef100_B7UN63
conserved hypothetical protein			PF06082.6
conserved hypothetical protein			UniRef100_B2N302
protein psiE		psiE	UniRef100_A7ZUQ1
MFS transporter, sugar porter family protein			TIGR00879
binding--dependent transport system inner membrane component family protein			PF00528.17
binding--dependent transport system inner membrane component family protein			PF00528.17
maltose-binding periplasmic protein		malE	UniRef100_P19576
maltose/maltodextrin import ATP-binding protein MalK	3.6.3.19	malK	UniRef100_Q57GZ7
maltoporin		lamB	UniRef100_C5A130
conserved hypothetical protein			UniRef100_E3Y4E7
maltose operon periplasmic family protein			PF07148.7
conserved hypothetical protein			UniRef100_E0J0F6
pentapeptide repeats family protein			PF13599.1
chorismate--pyruvate lyase	4.1.3.40	ubiC	UniRef100_C5A132
4-hydroxybenzoate polyprenyl transferase	2.5.1.-	ubiA	TIGR01474
glycerol-3-phosphate O-acyltransferase	2.3.1.15	plsB	TIGR03703
diacylglycerol kinase	2.7.1.107	dgkA	UniRef100_P0ABN3
repressor LexA	3.4.21.88	lexA	TIGR00498
MATE efflux family protein			TIGR00797
conserved hypothetical protein			UniRef100_P68207
ferric uptake regulator family protein			PF01475.14
conserved hypothetical protein			UniRef100_P32693
conserved hypothetical protein			PF10897.3
tRNA dihydrouridine synthase A family protein	1.-.-.-	dusA	TIGR00742
phage shock protein G		pspG	TIGR02975
quinone oxidoreductase 1	1.6.5.5	qorA	UniRef100_P28304
replicative DNA helicase	3.6.4.12	dnaB	TIGR00665
alanine racemase	5.1.1.1	alr	TIGR00492
aromatic-amino-acid aminotransferase	2.6.1.57	tyrB	UniRef100_P04693
			
hypothetical protein			default
class B acid phosphatase	3.1.3.2	aphA	UniRef100_P0AE22
conserved hypothetical protein			PF01894.12
conserved hypothetical protein			UniRef100_P0AF51
excinuclease ABC subunit A	3.1.25.-	uvrA	TIGR00630
single-stranded DNA-binding protein		ssb	UniRef100_P0AGE2
putative transmembrane protein			UniRef100_P32700
conserved hypothetical protein			UniRef100_P32701
regulatory protein soxS		soxS	UniRef100_P0A9E4
redox-sensitive transcriptional activator SoxR		soxR	TIGR01950
conserved hypothetical protein			UniRef100_A8A7G4
putative permease yjcD			UniRef100_P0AF53
na+/H+ antiporter			TIGR00831
pentapeptide repeats family protein			PF13599.1
cation/acetate symporter ActP		actP	TIGR02711
inner membrane protein yjcH		yjcH	UniRef100_P0AF54
acetate--CoA ligase	6.2.1.1	acs	TIGR02188
cytochrome c-552	1.7.2.2	nrfA	UniRef100_A7ZUU5
cytochrome c nitrite reductase, pentaheme subunit	1.7.2.2	nrfB	TIGR03146
cytochrome c nitrite reductase, Fe-S protein	1.7.2.2	nrfC	TIGR03149
cytochrome c nitrite reductase, NrfD subunit	1.7.2.2	nrfD	TIGR03148
cytochrome c-type biogenesis protein CcmF		ccmF	TIGR00353
cytochrome C biogenesis family protein			PF03918.9
TPR repeat family protein			PF13414.1
proton glutamate symport protein		gltP	UniRef100_P21345
conserved hypothetical protein			UniRef100_F3QAB5
formate dehydrogenase, alpha subunit	1.2.1.2		TIGR01591
molybdopterin oxidoreductase family protein			PF00384.17
multidrug resistance outer membrane protein mdtP		mdtP	UniRef100_P32714
fusaric acid resistance family protein			PF04632.7
efflux transporter, RND family, MFP subunit			TIGR01730
putative membrane protein			TMHMM
metallo-beta-lactamase superfamily protein			PF00753.22
D-allose kinase	2.7.1.55	alsK	UniRef100_P32718
D-allulose-6-phosphate 3-epimerase	5.1.3.-	alsE	UniRef100_P32719
branched-chain amino acid transport system / permease component family protein			PF02653.11
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
D-allose-binding periplasmic protein		alsB	UniRef100_P39265
HTH-type transcriptional regulator rpiR		rpiR	UniRef100_P0ACS8
ribose 5-phosphate isomerase B	5.3.1.6	rpiB	TIGR01120
conserved hypothetical protein			UniRef100_B7MR97
phosphonate metabolism protein PhnP		phnP	TIGR03307
acetyltransferase family protein			PF00583.19
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN		phnN	TIGR02322
phosphonate metabolism protein PhnM		phnM	TIGR02318
phosphonate C-P lyase system protein PhnL		phnL	TIGR02324
phosphonate C-P lyase system protein PhnK		phnK	TIGR02323
protein phnJ		phnJ	UniRef100_P16688
bacterial phosphonate metabolism family protein			PF05861.7
phosphonate C-P lyase system protein PhnH		phnH	TIGR03292
phosphonate C-P lyase system protein PhnG		phnG	TIGR03293
phosphonate metabolism transcriptional regulator PhnF		phnF	TIGR02325
binding--dependent transport system inner membrane component family protein			PF00528.17
putative phnE, subunit of alkylphosphonate ABC transporter			UniRef100_A1AIV0
phosphonate ABC transporter, periplasmic phosphonate binding protein		phnD	TIGR03431
phosphonate ABC transporter, ATP-binding protein	3.6.3.28	phnC	TIGR02315
protein phnB		phnB	UniRef100_P16681
phnA family protein			PF03831.9
50S ribosome-binding GTPase family protein			PF01926.18
yjcZ-like family protein			PF13990.1
proline/betaine transporter		proP	UniRef100_P0C0L8
sensor protein BasS	2.7.13.3	basS	UniRef100_P30844
transcriptional regulatory protein BasR		basR	UniRef100_P36556
phosphoethanolamine transferase eptA	2.7.-.-	eptA	UniRef100_P30845
arginine/agmatine antiporter		adiC	UniRef100_P60063
HTH-type transcriptional regulator AdiY		adiY	UniRef100_P33234
biodegradative arginine decarboxylase	4.1.1.19	adiA	UniRef100_P28629
melibiose operon regulatory protein		melR	UniRef100_P0ACH9
alpha-galactosidase	3.2.1.22	melA	UniRef100_P06720
melibiose carrier protein		melB	UniRef100_P02921
inner membrane protein yjdF		yjdF	UniRef100_P39270
fumarate hydratase class I, anaerobic	4.2.1.2	fumB	UniRef100_P14407
anaerobic C4-dicarboxylate transporter DcuB		dcuB	UniRef100_P0ABP1
transcriptional regulatory protein dcuR		dcuR	UniRef100_P0AD02
sensor histidine kinase DcuS	2.7.13.3	dcuS	UniRef100_P0AEC9
conserved hypothetical protein			UniRef100_P0AF60
acetyltransferase family protein			PF00583.19
conserved hypothetical protein			PF11080.3
conserved hypothetical protein			PF10753.4
lysine--tRNA ligase	6.1.1.6	lysS	TIGR00499
dipeptide permease D		dtpD	UniRef100_Q8X9D3
lysine decarboxylase, inducible	4.1.1.18	cadA	UniRef100_P0A9H4
transporter, basic amino acid/polyamine antiporter family protein			TIGR00905
transcriptional activator CadC		cadC	UniRef100_P23890
HTH-type transcriptional regulator yjdC		yjdC	UniRef100_P0ACU8
thiol:disulfide interchange protein DsbD	1.8.1.8	dsbD	UniRef100_P36655
divalent-cation tolerance protein CutA		cutA	UniRef100_A7ZV06
anaerobic C4-dicarboxylate transporter DcuA		dcuA	UniRef100_P0ABN7
aspartate ammonia-lyase	4.3.1.1	aspA	TIGR00839
conserved hypothetical protein			UniRef100_P37147
inner membrane protein yjeH		yjeH	UniRef100_P39277
10 kDa chaperonin		groS	UniRef100_A7ZV11
chaperonin GroL		groL	TIGR02348
conserved hypothetical protein			PF13698.1
putative predicted protein			UniRef100_P39279
kamA family protein			TIGR00238
translation elongation factor P		efp	TIGR00038
outer membrane lipoprotein blc		blc	UniRef100_P0A902
quaternary ammonium compound-resistance protein sugE		sugE	UniRef100_Q8XDQ5
beta-lactamase	3.5.2.6	ampC	UniRef100_P00811
fumarate reductase subunit D		frdD	UniRef100_B7UPX3
fumarate reductase subunit C		frdC	UniRef100_A7ZV25
fumarate reductase iron-sulfur subunit	1.3.99.1	frdB	UniRef100_P0AC49
fumarate reductase, flavoprotein subunit	1.3.99.1	frdA	TIGR01176
EF-P lysine aminoacylase GenX			TIGR00462
inner membrane transporter yjeM		yjeM	UniRef100_P39282
conserved hypothetical protein			UniRef100_P39283
inner membrane protein yjeO		yjeO	UniRef100_P39284
mechanosensitive ion channel family protein			PF00924.13
phosphatidylserine decarboxylase	4.1.1.65	psd	TIGR00163
ribosome small subunit-dependent GTPase A	3.6.-.-	rsgA	TIGR00157
oligoribonuclease	3.1.-.-	orn	UniRef100_A7ZV33
putative iron-sulfur cluster-binding protein			TIGR00276
conserved hypothetical protein			UniRef100_P31806
conserved hypothetical protein			PF02367.12
N-acetylmuramoyl-L-alanine amidase AmiB	3.5.1.28	amiB	UniRef100_P26365
DNA mismatch repair protein mutL		mutL	UniRef100_C5A1G1
tRNA dimethylallyltransferase	2.5.1.75	miaA	TIGR00174
RNA chaperone Hfq		hfq	TIGR02383
GTP-binding protein HflX		hflX	TIGR03156
hflK protein		hflK	TIGR01933
hflC protein		hflC	TIGR01932
conserved hypothetical protein			PF09838.4
adenylosuccinate synthase	6.3.4.4	purA	TIGR00184
HTH-type transcriptional repressor nsrR		nsrR	UniRef100_B7UQI7
ribonuclease R	3.1.-.-	rnr	TIGR02063
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB	2.1.1.-	rlmB	UniRef100_P63179
conserved hypothetical protein			PF09938.4
pspA/IM30 family protein			PF04012.7
conserved hypothetical protein			PF10679.4
conserved hypothetical protein			UniRef100_P0AF81
conserved hypothetical protein			PF06693.6
glutathionylspermidine synthase preATP-grasp family protein			PF03738.9
putative acyl-CoA dehydrogenase AidB			UniRef100_P33224
conserved hypothetical protein			PF07338.8
conserved hypothetical protein			PF07338.8
HTH-type transcriptional regulator ulaR		ulaR	UniRef100_A7ZV62
esterase yjfP	3.1.-.-	yjfP	UniRef100_P39298
metal-dependent hydrolase			UniRef100_A2PSJ5
ascorbate-specific permease IIC component ulaA		ulaA	UniRef100_P39301
ascorbate-specific phosphotransferase enzyme IIB component	2.7.1.69	ulaB	UniRef100_P69823
ascorbate-specific phosphotransferase enzyme IIA component	2.7.1.-	ulaC	UniRef100_P69821
3-keto-L-gulonate-6-phosphate decarboxylase ulaD	4.1.1.85	ulaD	UniRef100_B7UQK5
L-ribulose-5-phosphate 3-epimerase ulaE	5.1.3.22	ulaE	UniRef100_C4ZR74
L-ribulose-5-phosphate 4-epimerase UlaF	5.1.3.4	ulaF	UniRef100_C4ZR75
conserved hypothetical protein			PF07338.8
ribosomal protein S6		rpsF	TIGR00166
			
ribosomal protein S18		rpsR	TIGR00165
ribosomal protein L9		rplI	TIGR00158
conserved hypothetical protein			UniRef100_P39308
opacity-associated A N-terminal motif family protein			PF08525.6
conserved hypothetical protein			UniRef100_P39309
FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase	5.2.1.8	fklB	UniRef100_P0A9L3
D-serine/D-alanine/glycine transporter		cycA	UniRef100_P0AAE1
iron-sulfur cluster repair di-iron protein		ric	TIGR03652
inner membrane protein ytfF		ytfF	UniRef100_P39314
quinone oxidoreductase 2	1.6.5.2	qorB	UniRef100_P39315
putative transcriptional regulator			UniRef100_E7V4D9
2',3'-cyclic-nucleotide 2'-phosphodiesterase	3.1.4.16	cpdB	TIGR01390
3'(2'),5'-bisphosphate nucleotidase	3.1.3.7	cysQ	TIGR01331
conserved hypothetical protein			UniRef100_P39317
conserved hypothetical protein			UniRef100_P39187
conserved hypothetical protein			PF06526.7
conserved hypothetical protein			UniRef100_P0AE47
peptide methionine sulfoxide reductase MsrA	1.8.4.11	msrA	UniRef100_A7ZV98
surface antigen family protein			PF01103.18
conserved hypothetical protein			UniRef100_P39321
AIG2-like family protein			PF06094.7
antitoxin ChpS		chpS	UniRef100_P08365
mRNA interferase ChpB	3.1.-.-	chpB	UniRef100_P33647
inorganic pyrophosphatase	3.6.1.1	ppa	UniRef100_P0A7B0
ABC transporter periplasmic-binding protein ytfQ		ytfQ	UniRef100_P39325
ABC transporter family protein			PF00005.22
branched-chain amino acid transport system / permease component family protein			PF02653.11
branched-chain amino acid transport system / permease component family protein			PF02653.11
fructose-1,6-bisphosphatase class 1	3.1.3.11	fbp	UniRef100_A7ZVB0
L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase		mpl	TIGR01081
conserved hypothetical protein			UniRef100_A7ZVB3
protein pmbA		pmbA	UniRef100_P0AFK1
soluble cytochrome b562		cybC	UniRef100_P0ABE7
anaerobic ribonucleoside-triphosphate reductase activating protein	1.97.1.4	nrdG	TIGR02491
anaerobic ribonucleoside-triphosphate reductase	1.17.4.2	nrdD	TIGR02487
alpha,alpha-phosphotrehalase	3.2.1.93	treC	TIGR02403
PTS system trehalose-specific EIIBC component	2.7.1.69	treB	UniRef100_P36672
trehalose operon repressor		treR	TIGR02405
magnesium-translocating P-type ATPase	3.6.3.2	mgtA	TIGR01524
endoribonuclease L-PSP family protein			PF01042.16
aspartate carbamoyltransferase, regulatory subunit	2.1.3.2	pyrI	TIGR00240
aspartate carbamoyltransferase	2.1.3.2	pyrB	TIGR00670
endoribonuclease L-PSP family protein			PF01042.16
conserved hypothetical protein			UniRef100_P39333
bacterial regulatory s, tetR family protein			PF00440.18
conserved hypothetical protein			UniRef100_P0AF96
conserved hypothetical protein			UniRef100_P39336
ornithine carbamoyltransferase	2.1.3.3	argF	TIGR00658
regulator of ribonuclease activity B		rraB	UniRef100_P0AF91
acetyltransferase family protein			PF00583.19
inner membrane protein yjgN		yjgN	UniRef100_P39338
valine--tRNA ligase	6.1.1.9	valS	TIGR00422
DNA polymerase III subunit chi	2.7.7.7	holC	UniRef100_P28905
cytosol aminopeptidase	3.4.11.10	pepA	UniRef100_P68768
lipopolysaccharide export system permease protein lptF		lptF	UniRef100_P0AFA0
lipopolysaccharide export system permease protein lptG		lptG	UniRef100_P0ADC7
conserved hypothetical protein			UniRef100_P39342
HTH-type transcriptional regulator idnR		idnR	UniRef100_P39343
gnt-II system L-idonate transporter		idnT	UniRef100_P39344
gluconate 5-dehydrogenase	1.1.1.69	gno	UniRef100_P50199
L-idonate 5-dehydrogenase	1.1.1.264	idnD	UniRef100_P39346
carbohydrate kinase, thermoresistant glucokinase family protein	2.7.1.-		TIGR01313
zinc-binding dehydrogenase family protein			PF00107.21
			
phage integrase family protein			PF00589.17
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
conserved hypothetical protein			UniRef100_D8C251
sulfatase family protein			PF00884.18
conserved hypothetical protein			UniRef100_D8EKF7
transposase DDE domain protein			PF01609.16
sugar (and other) transporter family protein			PF00083.19
oxidoreductase , NAD-binding Rossmann fold family protein			PF01408.17
putative yjhD			UniRef100_P39354
putative membrane protein			TMHMM
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
transposase family protein			PF01527.15
integrase core domain protein			PF00665.21
			
conserved hypothetical protein			UniRef100_Q47719
ABC transporter family protein			PF00005.22
conserved hypothetical protein			UniRef100_D8C6G4
fe(3+) dicitrate transport system permease protein fecD		fecD	UniRef100_P15029
fecCD transport family protein			PF01032.13
periplasmic binding family protein			PF01497.13
fe(3+) dicitrate transport protein fecA		fecA	UniRef100_P13036
fecR family protein			PF04773.8
putative RNA polymerase sigma factor fecI			UniRef100_P23484
putative transposase			PF03400.8
putative transposase			PF03400.8
helix-turn-helix family protein			PF01381.17
H+ symporter family protein			TIGR00791
conserved hypothetical protein			UniRef100_P39358
conserved hypothetical protein			UniRef100_P75682
bacterial transcriptional regulator family protein			PF01614.13
putative sgc region transcriptional regulator			UniRef100_P39361
ribulose-phosphate 3 epimerase family protein			PF00834.14
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein			PF00359.17
putative sgc region protein SgcQ			UniRef100_P39364
galactitol permease IIC component		gatC	UniRef100_P69832
PTS system, Lactose/Cellobiose specific IIB subunit			PF02302.12
M42 glutamyl aminopeptidase family protein			PF05343.9
conserved hypothetical protein			UniRef100_P39367
acetyltransferase family protein			PF00583.19
conserved hypothetical protein			PF09857.4
dNA helicase, superfamily I			UniRef100_E2WQA4
phospholipase D family protein			PF00614.17
conserved hypothetical protein			PF03629.13
N-acetylneuraminate epimerase	5.1.3.n1	nanM	UniRef100_P44544
putative N-acetylneuraminic acid outer membrane channel protein NanC			UniRef100_P69857
phage integrase family protein			PF00589.17
phage integrase family protein			PF00589.17
type-1 fimbrial protein, A chain		fimA	UniRef100_P04128
fimbrial family protein			PF00419.15
chaperone protein fimC		fimC	UniRef100_P31697
outer membrane usher protein fimD		fimD	UniRef100_P30130
protein fimF		fimF	UniRef100_P08189
protein fimG		fimG	UniRef100_P08190
protein fimH		fimH	UniRef100_P08191
high-affinity gluconate transporter		gntT	UniRef100_P39835
mannonate dehydratase	4.2.1.8	uxuA	TIGR00695
mannitol dehydrogenase Rossmann domain protein			PF01232.18
			
bacterial regulatory s, gntR family protein			PF00392.16
conserved hypothetical protein			UniRef100_P39374
HTH-type transcriptional regulator QseD		qseD	UniRef100_P39376
anti-adapter protein iraD		iraD	UniRef100_C4ZT14
beta-aspartyl peptidase	3.4.19.5	iadA	TIGR01975
inner membrane protein yjiG		yjiG	UniRef100_P0AEI0
nucleoside recognition family protein			PF07670.9
conserved hypothetical protein			UniRef100_E3Y0L8
RNA 2'-phosphotransferase, Tpt1 / KptA family protein			PF01885.11
major Facilitator Superfamily protein			PF07690.11
conserved hypothetical protein			UniRef100_A1AJL2
conserved hypothetical protein			PF11823.3
putative CoA-substrate-specific enzyme activase domain protein			TIGR00241
2-hydroxyglutaryl-CoA dehydratase, D-component family protein			PF06050.8
conserved hypothetical protein			PF04286.7
multidrug resistance protein mdtM		mdtM	UniRef100_P39386
putative predicted protein			UniRef100_D6IJI1
conserved hypothetical family protein			TIGR01784
conserved hypothetical family protein			TIGR01784
conserved hypothetical protein			UniRef100_P39389
conserved hypothetical protein			PF06568.6
conserved hypothetical protein			UniRef100_P39391
putative phosphoethanolamine transferase			UniRef100_P39393
mcrBC 5-methylcytosine restriction system component family protein			PF10117.4
5-methylcytosine-specific restriction enzyme B	3.1.21.-	mcrB	UniRef100_P15005
toxic protein symE	3.1.-.-	symE	UniRef100_C4ZT30
type-1 restriction enzyme EcoKI specificity protein		hsdS	UniRef100_P05719
type I restriction enzyme EcoKI M protein	2.1.1.72	hsdM	UniRef100_P08957
DEAD/DEAH box helicase family protein			PF00270.24
mrr restriction system protein		mrr	UniRef100_P24202
conserved hypothetical protein			UniRef100_P24203
conserved hypothetical protein			PF04328.8
inner membrane protein YjiY		yjiY	UniRef100_P39396
methyl-accepting chemotaxis protein I		tsr	UniRef100_P02942
L-galactonate transporter		yjjL	UniRef100_P39398
bacterial regulatory s, gntR family protein			PF00392.16
zinc-binding dehydrogenase family protein			PF00107.21
sulfatase family protein			PF00884.18
conserved hypothetical protein			PF10696.4
DNA replication protein dnaC		dnaC	UniRef100_P0AEF2
primosomal protein 1		dnaT	UniRef100_A7ZVQ2
conserved hypothetical protein			UniRef100_B7UQZ2
inner membrane protein yjjP		yjjP	UniRef100_P0ADD5
bacterial regulatory s, luxR family protein			PF00196.14
bacterial regulatory s, luxR family protein			PF00196.14
siderophore-iron reductase FhuF	1.-.-.-	fhuF	TIGR03951
conserved hypothetical protein			PF07256.7
ribosomal RNA small subunit methyltransferase C	2.1.1.172	rsmC	UniRef100_B7MNC1
DNA polymerase III, psi subunit	2.7.7.7	holD	TIGR00664
ribosomal-protein-alanine acetyltransferase	2.3.1.128	rimI	TIGR01575
pyrimidine 5'-nucleotidase YjjG	3.1.3.5	yjjG	UniRef100_P0A8Y2
peptide chain release factor 3		prfC	TIGR00503
osmotically-inducible protein Y		osmY	UniRef100_P0AFH9
conserved hypothetical protein			PF07043.8
patatin-like phospholipase family protein			PF01734.17
conserved hypothetical protein			UniRef100_P39408
radical SAM superfamily protein			PF04055.16
conserved hypothetical protein			UniRef100_P37342
conserved hypothetical protein			UniRef100_E1HQT0
deoxyribose-phosphate aldolase	4.1.2.4	deoC	TIGR00126
thymidine phosphorylase	2.4.2.4	deoA	TIGR02643
phosphopentomutase	5.4.2.7	deoB	TIGR01696
purine nucleoside phosphorylase	2.4.2.1	deoD	TIGR00107
hipA-like N-terminal domain protein			PF07805.7
lipoate-protein ligase A	2.7.7.63	lplA	UniRef100_C4ZT68
bacterial virulence factor hemolysin family protein			PF10144.4
phosphoserine phosphatase SerB	3.1.3.3	serB	TIGR00338
DNA repair protein RadA		radA	TIGR00416
trifunctional NAD biosynthesis/regulator protein NadR	2.7.1.22	nadR	UniRef100_P27278
putative transcriptional regulator			UniRef100_Q0KHM2
heme ABC exporter, ATP-binding protein CcmA	3.6.3.41	ccmA	TIGR01189
soluble lytic murein transglycosylase	4.2.2.n1	slt	UniRef100_P0AGC4
trp operon repressor		trpR	TIGR01321
conserved hypothetical protein			UniRef100_B1IS25
right origin-binding protein		rob	UniRef100_P0ACI1
putative phosphoglycerate mutase gpmB			UniRef100_A7ZVT7
creA family protein			PF05981.7
transcriptional regulatory , C terminal family protein			PF00486.23
sensor protein CreC	2.7.13.3	creC	UniRef100_P08401
inner membrane protein CreD		creD	UniRef100_P08369
transcriptional regulatory , C terminal family protein			PF00486.23
RNA methyltransferase, TrmH , group 1 family protein	2.1.1.-		TIGR00050
